Protein Alignment Rsf1 and SF2

DIOPT Version :10

• Sequence 1: NP_477001.2
• Gene: Rsf1 / 34370
• FlyBaseID: FBgn0011305
• Length: 200
• Species: Drosophila melanogaster
• Sequence 2: NP_652611.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Alignment Length: 275
• Identity: 81/275 - (29%)
• Similarity: 100/275 - (36%)
• Gaps: 107/275 - (38%)

  Fly     4 MGDQRGTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWI--AFNPPGFAFVEFEHRDDAEKACDIL 66
            ||.:...|:|||||...::..|::..|.|:||:..|.:  ...|| |||||||...||:.|....
  Fly     1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADDAVKAR 64

  Fly    67 NGSELLGSQLRVEISKGRPRQGRRGGPMD-RGGRRGDFGRHSITSGGSGGGGFRQRG-------- 122
            :|.:..|.:||||..:|       |||.. |||.|.|..|       .|||....||
  Fly    65 DGYDYDGYRLRVEFPRG-------GGPGSYRGGNRNDRSR-------DGGGRMGGRGPPAKRSQY 115

  Fly   123 --------SSGSSS----------------------------RHTERGYS--------------- 136
                    :|||..                            ||.:..|:
  Fly   116 RVMVTGLPASGSWQDLKDHMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGE 180

  Fly   137 ---------SG---RSGASSYNGREGGGSGFNRREVYGGG----RDSSRYSSGSS-------ASY 178
                     ||   |.|....:|..|||||       |||    ||.||..|.||       .:|
  Fly   181 VAYIRVREDSGDNDRGGGGGGSGGGGGGSG-------GGGSRDYRDRSRSRSFSSRPRRRGTPTY 238

  Fly   179 GRTGGQSAGRFRSRS 193
            .....||..|.||||
  Fly   239 SPVRRQSYSRSRSRS 253

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rsf1	NP_477001.2	RRM_SRSF3_like	11..82	CDD:409808	30/72 (42%)
SF2	NP_652611.1	RRM_SF	3..80	CDD:473069	30/77 (39%)
		RRM2_SRSF1_like	115..188	CDD:410013	6/72 (8%)