Protein Alignment Rsf1 and snrnp70

DIOPT Version :10

• Sequence 1: NP_477001.2
• Gene: Rsf1 / 34370
• FlyBaseID: FBgn0011305
• Length: 200
• Species: Drosophila melanogaster
• Sequence 2: NP_001268699.1
• Gene: snrnp70 / 493488
• XenbaseID: XB-GENE-992818
• Length: 471
• Species: Xenopus tropicalis
• Alignment Length: 196
• Identity: 52/196 - (26%)
• Similarity: 79/196 - (40%)
• Gaps: 45/196 - (22%)

  Fly     2 SSMGDQRGTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFN-----PPGFAFVEFEHRDDAEK 61
            ::.||...| ::|..:.....:..|..||..||.:..:.:.:|     |.|:||:|:||..|...
 Frog    96 NAQGDAFKT-LFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFIEYEHERDMHS 159

  Fly    62 ACDILNGSELLGSQLRVEISKGRPRQGRRGGPMDRGGRRGDFGRHSITSGGSGGGGFRQRGSSGS 126
            |....:|.::.|.::.|::.:||..:|.|  |...||               |.||.| ||.:..
 Frog   160 AYKHADGKKIDGRRVLVDVERGRTVKGWR--PRRLGG---------------GLGGTR-RGGADV 206

  Fly   127 SSRHTERGYSSGRSGASSYNGREGGGSGFNRREVYGGGRDSSRYSSGSSASYGRTGGQSAGRFRS 191
            :.||      |||...|.|:.|:               ||..|.......|..|...:...|.||
 Frog   207 NIRH------SGRDDTSRYDERD---------------RDRERERDRRERSRERDKERERRRSRS 250

  Fly   192 R 192
            |
 Frog   251 R 251

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rsf1	NP_477001.2	RRM_SRSF3_like	11..82	CDD:409808	19/75 (25%)
snrnp70	NP_001268699.1	U1snRNP70_N	3..94	CDD:432406
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	48..78
		Required for interaction with U1 RNA. /evidence=ECO:0000250|UniProtKB:P08621	92..202		33/124 (27%)
		RRM_snRNP70	102..187	CDD:409682	22/85 (26%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	187..471		27/104 (26%)