Protein Alignment Rsf1 and srsf12

DIOPT Version :10

• Sequence 1: NP_477001.2
• Gene: Rsf1 / 34370
• FlyBaseID: FBgn0011305
• Length: 200
• Species: Drosophila melanogaster
• Sequence 2: NP_001007946.1
• Gene: srsf12 / 493321
• XenbaseID: XB-GENE-994981
• Length: 253
• Species: Xenopus tropicalis
• Alignment Length: 220
• Identity: 64/220 - (29%)
• Similarity: 97/220 - (44%)
• Gaps: 26/220 - (11%)

  Fly     1 MSSMGDQRGTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFN-----PPGFAFVEFEHRDDAE 60
            ||.......|.::|.|:.|..:.:||..||.:||.:..|::..:     |.|||:::||...|||
 Frog     1 MSRYSRPPNTSLFVRNVADATRPEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYIQFEDVRDAE 65

  Fly    61 KACDILNGSELLGSQLRVEISKG--------RPRQGRRGGPMDRGGRRGDFGRHSITSGGSGGGG 117
            .|...||...:.|.|:.::.::|        :.::.....|:||...|....|.:.:...|...|
 Frog    66 DALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKERHACSPVDRRRSRSHSRRRTRSRSSSWDRG 130

  Fly   118 FRQRGSSGSSSRHTERGYSSGRSGASSYNGREGGGSGFNRREVYGGGRDSSRYSS--------GS 174
             |:|..|..||||....||..:|.:.|...|    |...:|..:..||..|...|        .|
 Frog   131 -RRRSGSLKSSRHRRHSYSHSKSRSKSPQRR----SRTPQRHSFSRGRSRSMEKSPSGSPPKESS 190

  Fly   175 SASYGRTGGQSAGRFRSRSPVGNHR 199
            |.|..|:|.:.:|..||.|....||
 Frog   191 SGSKSRSGQRRSGSTRSHSKSPRHR 215

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rsf1	NP_477001.2	RRM_SRSF3_like	11..82	CDD:409808	24/75 (32%)
srsf12	NP_001007946.1	RRM_SF	6..99	CDD:473069	26/92 (28%)
		U2AF_lg	129..>218	CDD:273727	30/92 (33%)