DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rsf1 and srsf7

DIOPT Version :10

Sequence 1:NP_477001.2 Gene:Rsf1 / 34370 FlyBaseID:FBgn0011305 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_001007487.1 Gene:srsf7 / 493215 XenbaseID:XB-GENE-920026 Length:234 Species:Xenopus tropicalis


Alignment Length:209 Identity:80/209 - (38%)
Similarity:96/209 - (45%) Gaps:28/209 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSMGDQRG-TRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACD 64
            ||..|...| .:||||||.....|.:||..|:.||.|.:||||.|||||||||||...|||.|..
 Frog     1 MSRYGRYAGEAKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDTRDAEDAVR 65

  Fly    65 ILNGSELLGSQLRVEISKGRPRQGRRGGPMDRG-----------GRRG----DFGRHSITSGGSG 114
            .|:|..:.||::|||:|.|.||:.|...|..|.           |.:|    |..|:|...    
 Frog    66 GLDGKVICGSRVRVELSTGMPRRSRYDRPPARRPFDPSDRCYECGEKGHYAYDCQRYSRRR---- 126

  Fly   115 GGGFRQRGSSGSSSRHTERGYSSGRSGASSYNGREGGGSGFNRREVYGGGRDSSRYSSGSSASYG 179
                |.|..|.|.||...|.|:..||.:.....|    |...||......|.|...:..||.|..
 Frog   127 ----RSRTRSRSHSRSRGRRYTRSRSRSRGRRSR----SASPRRSRSASPRRSRNATPRSSRSGS 183

  Fly   180 RTGGQSAGRFRSRS 193
            ....:|..|.||||
 Frog   184 VKRSRSLSRSRSRS 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rsf1NP_477001.2 RRM_SRSF3_like 11..82 CDD:409808 39/70 (56%)
srsf7NP_001007487.1 RRM_SF 12..88 CDD:473069 42/75 (56%)
zf-CCHC 104..119 CDD:395050 2/14 (14%)

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