Protein Alignment Rsf1 and srsf1

DIOPT Version :10

• Sequence 1: NP_477001.2
• Gene: Rsf1 / 34370
• FlyBaseID: FBgn0011305
• Length: 200
• Species: Drosophila melanogaster
• Sequence 2: NP_001006919.1
• Gene: srsf1 / 448766
• XenbaseID: XB-GENE-486875
• Length: 267
• Species: Xenopus tropicalis
• Alignment Length: 239
• Identity: 85/239 - (35%)
• Similarity: 109/239 - (45%)
• Gaps: 49/239 - (20%)

  Fly     1 MSSMGDQRG------TRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWI---AFNPPGFAFVEFEHR 56
            ||..|..||      .|:|||||...::..|:|..|.|||.:..:.:   ...|| |||||||..
 Frog     1 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPP-FAFVEFEDP 64

  Fly    57 DDAEKACDILNGSELLGSQLRVEISK-GRPRQGRRGGPMDRGGRRGDFGRHSITSGGSGGGGFRQ 120
            .|||.|....:|.:..|.:||||..: ||...||.||....||..|..|...  .||.||||...
 Frog    65 RDAEDAVYGRDGYDYDGYRLRVEFPRSGRGAGGRGGGGGGGGGGGGGGGGGG--GGGGGGGGGAP 127

  Fly   121 RGSSGSSSRHTE-RGYSSGRSGASSYNG-----REGG----------GSG---FNRRE--VYGGG 164
            ||..|..||.:| |...||...:.|:..     ||.|          |:|   |.|:|  .|...
 Frog   128 RGRYGPPSRRSEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVR 192

  Fly   165 R-DSSRYSS--GSSA------------SYGRTGGQSAGRFRSRS 193
            : |::::.|  |.:|            ||||:..:|..|.||||
 Frog   193 KLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRS 236

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rsf1	NP_477001.2	RRM_SRSF3_like	11..82	CDD:409808	31/73 (42%)
srsf1	NP_001006919.1	RRM1_SRSF1	12..90	CDD:410010	31/78 (40%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	90..137		20/48 (42%)
		RRM2_SRSF1	132..215	CDD:410160	21/82 (26%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	212..267		10/25 (40%)