Protein Alignment Rsf1 and tra2b

DIOPT Version :10

• Sequence 1: NP_477001.2
• Gene: Rsf1 / 34370
• FlyBaseID: FBgn0011305
• Length: 200
• Species: Drosophila melanogaster
• Sequence 2: NP_001006878.1
• Gene: tra2b / 448667
• XenbaseID: XB-GENE-5864557
• Length: 293
• Species: Xenopus tropicalis
• Alignment Length: 220
• Identity: 65/220 - (29%)
• Similarity: 87/220 - (39%)
• Gaps: 74/220 - (33%)

  Fly    11 RVYVGN--------------LTDKVKKDDLEGEFTKYGKLNSVWIAFNPP-----GFAFVEFEHR 56
            |.:|||              |:....:.||...|:|||.::.|.|.::..     ||:||.||:.
 Frog   109 RRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPISDVSIVYDQQSRRSRGFSFVYFENV 173

  Fly    57 DDAEKACDILNGSELLGSQLRVEIS-------------KGRPRQG--RRGGPMDRGGRRGDFGRH 106
            |||::|.:..||.||.|.::||:.|             .|||..|  ||....|||..||
 Frog   174 DDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRG----- 233

  Fly   107 SITSGGSGGGGFRQRGSSGSSSRHTERGYSSGRSGASSYNGREGGGSGFNRREVYGGGRDSSRYS 171
                                       ||......:.||.|..|||.|:.      ||:|..::|
 Frog   234 ---------------------------GYDDREYYSRSYRGGGGGGGGWR------GGQDRDQFS 265

  Fly   172 SGSSAS--YGRTGGQSAGRFRSRSP 194
            ...|.|  |.|...:|..|.||.||
 Frog   266 RRRSPSPYYSRGSYRSRSRSRSYSP 290

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rsf1	NP_477001.2	RRM_SRSF3_like	11..82	CDD:409808	31/102 (30%)
tra2b	NP_001006878.1	RRM_TRA2	121..200	CDD:409798	27/78 (35%)