DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Rsf1 and srsf3

DIOPT Version :9

Sequence 1:	NP_001260318.1	Gene:	Rsf1 / 34370	FlyBaseID:	FBgn0011305	Length:	200	Species:	Drosophila melanogaster
Sequence 2:	XP_012815513.1	Gene:	srsf3 / 448605	XenbaseID:	XB-GENE-490817	Length:	183	Species:	Xenopus tropicalis

Alignment Length:	185	Identity:	72/185 - (38%)
Similarity:	88/185 - (47%)	Gaps:	37/185 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly    11 RVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGSELLGSQ 75
            :||||||.:...|.:||..|..||.|.|||:|.|||||||||||...||..|...|:|..|.|.:
Frog    30 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCR 94

  Fly    76 LRVEISKGRPRQGRRGGPMDRGGR-RGDFGRHSITSGGSGGGGFRQRGSSGSSSRHTERGYSSGR 139
            :|||:|.|..|...||.|.....| |.|:.|.|...        |:|     |.|  .|.:|..|
Frog    95 VRVELSNGEKRSRNRGPPPSWNRRPRDDYRRRSPPP--------RRR-----SPR--RRSFSRSR 144

  Fly   140 SGASSYNGREGGGSGFNRREVYGGGRDSSRYSSGS-SASYGRTGGQSAGRFRSRS 193
            |.:.|.:         .|||     |..||..:.. |.|:.|:      |.||||
Frog   145 SRSLSRD---------RRRE-----RSLSRERNHKPSRSFSRS------RSRSRS 179

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rsf1	NP_001260318.1	RRM_SRSF3_like	11..82	CDD:409808	38/70 (54%)
srsf3	XP_012815513.1	RRM	<11..>112	CDD:223796	43/81 (53%)
srsf3	XP_012815513.1	RRM_SF	25..105	CDD:302621	40/74 (54%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1533297at2759
OrthoFinder	1	1.000	-	-		FOG0000474
OrthoInspector	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR23147
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	4.020