Protein Alignment Rsf1 and srsf5b

DIOPT Version :10

• Sequence 1: NP_477001.2
• Gene: Rsf1 / 34370
• FlyBaseID: FBgn0011305
• Length: 200
• Species: Drosophila melanogaster
• Sequence 2: NP_001002610.1
• Gene: srsf5b / 436883
• ZFINID: ZDB-GENE-040718-354
• Length: 285
• Species: Danio rerio
• Alignment Length: 298
• Identity: 74/298 - (24%)
• Similarity: 98/298 - (32%)
• Gaps: 123/298 - (41%)

  Fly     9 GTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGSELLG 73
            |.|:::|.|....::.|:|..|..||::..:.:   ..||.||||:...|||.|...|:|.||..
Zfish     3 GCRIFIGRLNPSAREKDVERFFKGYGRIRDIDL---KRGFGFVEFDDPRDAEDAVYELDGKELCN 64

  Fly    74 SQLRVEISKGRPRQGR-RGGPMDRGGR------RG------------------------------ 101
            .::.:|.::.|.|.|| |||    |||      ||
Zfish    65 ERVTIEHARVRLRGGRGRGG----GGRFPARYGRGSQDSRRNPPPMRTENRLIVENLSSRVSWQD 125

  Fly   102 --------------------------DFGRHS-------ITSGGSGGG-----------GFRQRG 122
                                      :|..||       ..||....|           ..|.|.
Zfish   126 LKDFMRQAGEVTFADAHRPNLNEGVVEFASHSDLKNALEKLSGKEINGRKIKLVEASRKKSRSRS 190

  Fly   123 SSGSSSRHTERGYSSGRSGASSYNGREGGGSGFNRREVYGGGRDSSRYSSGS------------- 174
            .|.||||...||.|:.||.:.|   |.......||      .|..||.:|.|
Zfish   191 RSNSSSRSRSRGRSASRSRSRS---RSHSPKSHNR------SRSRSRSASASPVRPKEAPRPESA 246

  Fly   175 -------------SASYGRTGGQSAGRFRSRSPVGNHR 199
                         |.|..|:..:|..|.|||||..:.|
Zfish   247 SPPASAQHPPRSRSRSRSRSRSRSRSRSRSRSPSTDSR 284

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rsf1	NP_477001.2	RRM_SRSF3_like	11..82	CDD:409808	23/70 (33%)
srsf5b	NP_001002610.1	RRM1_SRSF5	5..74	CDD:410008	23/71 (32%)
		RRM2_SRSF5	101..181	CDD:410158	6/79 (8%)