Protein Alignment Rsf1 and B52

DIOPT Version :10

• Sequence 1: NP_477001.2
• Gene: Rsf1 / 34370
• FlyBaseID: FBgn0011305
• Length: 200
• Species: Drosophila melanogaster
• Sequence 2: NP_788671.2
• Gene: B52 / 41670
• FlyBaseID: FBgn0004587
• Length: 355
• Species: Drosophila melanogaster
• Alignment Length: 272
• Identity: 79/272 - (29%)
• Similarity: 101/272 - (37%)
• Gaps: 107/272 - (39%)

  Fly     9 GTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGSELLG 73
            |:|||||.|...|::.|||..|..||:...:.|   ..|:.|||||...||:.|...|||.||||
  Fly     3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILI---KNGYGFVEFEDYRDADDAVYELNGKELLG 64

  Fly    74 SQLRVEISKGRPRQGRRGGPMDR-GGRRGDFGRHSITSGGSGGGGFRQRG-SSGSSSRH-----T 131
            .::.||.::|..|...|....|| ||||           |.|||.:.::. :|.||||:     |
  Fly    65 ERVVVEPARGTARGSNRDRYDDRYGGRR-----------GGGGGRYNEKNKNSRSSSRYGPPLRT 118

  Fly   132 E-----RGYSS-----------GRSGASSY----------------------------------- 145
            |     ...||           .::|..:|
  Fly   119 EYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNG 183

  Fly   146 ----------NGREGGGSGFNRREVYGGGRDSSRYSSGSSASYGRTGGQS--------------- 185
                      .||.|||.        |.||..||.||..|.|..|...:|
  Fly   184 RRIHLVEDRRGGRSGGGG--------GSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSK 240

  Fly   186 --AGRFRSRSPV 195
              .||.:|:|||
  Fly   241 SRGGRSKSKSPV 252

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rsf1	NP_477001.2	RRM_SRSF3_like	11..82	CDD:409808	32/70 (46%)
B52	NP_788671.2	RRM1_SRSF4_like	5..74	CDD:409774	32/71 (45%)
		RRM2_SRSF4_like	120..191	CDD:410012	4/70 (6%)