Protein Alignment Rsf1 and srsf6a

DIOPT Version :10

• Sequence 1: NP_477001.2
• Gene: Rsf1 / 34370
• FlyBaseID: FBgn0011305
• Length: 200
• Species: Drosophila melanogaster
• Sequence 2: XP_005161979.1
• Gene: srsf6a / 406775
• ZFINID: ZDB-GENE-040426-2824
• Length: 400
• Species: Danio rerio
• Alignment Length: 256
• Identity: 79/256 - (30%)
• Similarity: 98/256 - (38%)
• Gaps: 72/256 - (28%)

  Fly    11 RVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGSELLGSQ 75
            |||:|.|:..|::.|::..|:.||||..|.:   ..|:.|||||...||:.|...|||.||.|.:
Zfish     3 RVYIGRLSYHVREKDIQRFFSGYGKLLEVDL---KNGYGFVEFEDTRDADDAVYELNGKELCGER 64

  Fly    76 LRVEISKGRPRQGR--RGGPMDRGGRRGDFGRHSITSGGSGGGGFRQRGSSGSSSR--------- 129
            :.||.::| ||:.|  .||....||..|..|.:....||.||||....|.||.|||
Zfish    65 VMVEHARG-PRRDRDSYGGGGGGGGGGGGGGGYYGGGGGGGGGGGGGGGRSGYSSRSRTGRDKYG 128

  Fly   130 --------------------------------------HTE---------RGYSSGRSGASSYNG 147
                                                  |.|         |.||..|......:|
Zfish   129 PPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERANEGVIEFRSYSDMRRALEKLDG 193

  Fly   148 REGGGSGF-------NRREVYGGGRDSSRYSSGSSASYGRTGGQSA--GRFRSRSPVGNHR 199
            .:..|...       .||..|.|.|..|| |...|.|..|...:|.  .|.||||....||
Zfish   194 TDINGRKIRLVEDKPRRRRSYSGSRSRSR-SRRRSRSRSRRSSRSRSNSRSRSRSRSRRHR 253

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rsf1	NP_477001.2	RRM_SRSF3_like	11..82	CDD:409808	30/70 (43%)
srsf6a	XP_005161979.1	RRM_SF	1..72	CDD:473069	30/71 (42%)
		RRM2_SRSF6	135..207	CDD:410159	8/71 (11%)