Protein Alignment Rsf1 and tra2b

DIOPT Version :10

• Sequence 1: NP_477001.2
• Gene: Rsf1 / 34370
• FlyBaseID: FBgn0011305
• Length: 200
• Species: Drosophila melanogaster
• Sequence 2: NP_957491.1
• Gene: tra2b / 394172
• ZFINID: ZDB-GENE-040426-1094
• Length: 278
• Species: Danio rerio
• Alignment Length: 188
• Identity: 59/188 - (31%)
• Similarity: 74/188 - (39%)
• Gaps: 68/188 - (36%)

  Fly    25 DLEGEFTKYGKLNSVWIAFNPP-----GFAFVEFEHRDDAEKACDILNGSELLGSQLRVEIS--- 81
            ||...|:|||.|:.|.|.::..     |||.|.||:|:|:::|.:..||.||.|.::||:.|
Zfish   138 DLREVFSKYGPLSDVCIVYDQQSRRSRGFALVYFENREDSKEAKERANGMELDGRRIRVDYSITK 202

  Fly    82 ----------KGRPRQGRRGGPMDRGGRRGDFGRHSITSGGSGGGGFRQRGSSGSSSRHTERGYS 136
                      .|||..|  |||  ...||.|                       |..|..||||
Zfish   203 GPHTPTPGIYMGRPTYG--GGP--SVSRRRD-----------------------SYDRGYERGY- 239

  Fly   137 SGRSGASSYNGREGGGSGFNRREVYGGGRDSSRYSSGSSASYGRTGGQSAGRFRSRSP 194
                  .||..|:...   |||      |..|.|       |.|...:|..|.||.||
Zfish   240 ------DSYEDRDYHN---NRR------RSPSPY-------YSRGPYRSRSRSRSYSP 275

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rsf1	NP_477001.2	RRM_SRSF3_like	11..82	CDD:409808	26/74 (35%)
tra2b	NP_957491.1	SF-CC1	23..>199	CDD:273721	25/60 (42%)
		RRM_TRA2B	116..202	CDD:410046	26/63 (41%)