Protein Alignment Rsf1 and srsf1b

DIOPT Version :10

• Sequence 1: NP_477001.2
• Gene: Rsf1 / 34370
• FlyBaseID: FBgn0011305
• Length: 200
• Species: Drosophila melanogaster
• Sequence 2: NP_956887.2
• Gene: srsf1b / 393565
• ZFINID: ZDB-GENE-040426-1467
• Length: 245
• Species: Danio rerio
• Alignment Length: 222
• Identity: 77/222 - (34%)
• Similarity: 100/222 - (45%)
• Gaps: 60/222 - (27%)

  Fly    11 RVYVGNLTDKVKKDDLEGEFTKYGKLNSVWI---AFNPPGFAFVEFEHRDDAEKACDILNGSELL 72
            |:|||||...::..|:|..|.|||.:..:.:   ...|| |||||||...|||.|....:|.:..
Zfish    16 RIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPP-FAFVEFEDPRDAEDAVYGRDGYDYD 79

  Fly    73 GSQLRVEISKGRPRQGRRGGPMDRGGRRGDFGRHSITSGGSGGGGFRQRGSSGSSSRHTE-RGYS 136
            |.:||||.    ||.|       |||.||         ||.|||....||..|..||.:| |...
Zfish    80 GYRLRVEF----PRSG-------RGGGRG---------GGGGGGVGAPRGRYGPPSRRSEYRVIV 124

  Fly   137 SGRSGASSYNG-----REGG----------GSG---FNRRE--VYGGGR-DSSRYSS--GSSA-- 176
            ||...:.|:..     ||.|          |:|   |.|:|  .|...: |::::.|  |.:|
Zfish   125 SGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYI 189

  Fly   177 ----------SYGRTGGQSAGRFRSRS 193
                      ||||:..:|..|.||||
Zfish   190 RVKVDGPRSPSYGRSRSRSRSRSRSRS 216

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rsf1	NP_477001.2	RRM_SRSF3_like	11..82	CDD:409808	31/73 (42%)
srsf1b	NP_956887.2	RRM1_SRSF1	11..89	CDD:410010	31/77 (40%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	89..116		15/42 (36%)
		RRM2_SRSF1	112..195	CDD:410160	21/82 (26%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	192..245		10/25 (40%)