Protein Alignment Rsf1 and srsf3a

DIOPT Version :9

• Sequence 1: NP_001260318.1
• Gene: Rsf1 / 34370
• FlyBaseID: FBgn0011305
• Length: 200
• Species: Drosophila melanogaster
• Sequence 2: NP_001002053.1
• Gene: srsf3a / 368925
• ZFINID: ZDB-GENE-030616-631
• Length: 174
• Species: Danio rerio
• Alignment Length: 196
• Identity: 78/196 - (39%)
• Similarity: 93/196 - (47%)
• Gaps: 34/196 - (17%)

  Fly     4 MGDQRGTR-------VYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEK 61
            |||...||       ||||||.:...|.:||..|..||.|.|||:|.|||||||||||...||..
Zfish     1 MGDPSLTRDCPLDCKVYVGNLGNSGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATD 65

  Fly    62 ACDILNGSELLGSQLRVEISKGRPRQGRRGGPMDRGGR-RGDFGRHSITSGGSGGGGFRQRGSSG 125
            |...|:|..|.|.::|||:|.|..|...||.|.....| |.|:.|         |..:|:|.|..
Zfish    66 AVRELDGRTLCGCRVRVEMSNGEKRSRFRGPPPSWSRRPRDDYRR---------GDDYRRRSSPP 121

  Fly   126 SSSRHTERGYSSGRSGASSYNGREGGGSGFNRREVYGGGRDSSR---YSSGSSASYGRTGGQSAG 187
            :..|...|.:|..||.:.|   ||      .|||     |..||   |....|.|..|:..:|.|
Zfish   122 ARHRSPRRSFSRSRSRSLS---RE------RRRE-----RSLSRDRNYKPSRSFSGSRSRSRSNG 172

  Fly   188 R 188
            |
Zfish   173 R 173

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rsf1	NP_001260318.1	RRM_SRSF3_like	11..82	CDD:409808	39/77 (51%)
srsf3a	NP_001002053.1	RRM_SF	10..90	CDD:302621	40/79 (51%)
		RRM	<13..>97	CDD:223796	43/83 (52%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0107
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1533297at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910