Protein Alignment Rsf1 and Srsf3

DIOPT Version :9

• Sequence 1: NP_001260318.1
• Gene: Rsf1 / 34370
• FlyBaseID: FBgn0011305
• Length: 200
• Species: Drosophila melanogaster
• Sequence 2: NP_001041372.1
• Gene: Srsf3 / 361814
• RGDID: 1309233
• Length: 164
• Species: Rattus norvegicus
• Alignment Length: 185
• Identity: 73/185 - (39%)
• Similarity: 89/185 - (48%)
• Gaps: 37/185 - (20%)

  Fly    11 RVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGSELLGSQ 75
            :||||||.:...|.:||..|..||.|.|||:|.|||||||||||...||..|...|:|..|.|.:
  Rat    11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCR 75

  Fly    76 LRVEISKGRPRQGRRGGPMDRGGR-RGDFGRHSITSGGSGGGGFRQRGSSGSSSRHTERGYSSGR 139
            :|||:|.|..|...||.|...|.| |.|:.|.|...        |:|     |.|  .|.:|..|
  Rat    76 VRVELSNGEKRSRNRGPPPSWGRRPRDDYRRRSPPP--------RRR-----SPR--RRSFSRSR 125

  Fly   140 SGASSYNGREGGGSGFNRREVYGGGRDSSRYSSGS-SASYGRTGGQSAGRFRSRS 193
            |.:.|.:         .|||     |..||..:.. |.|:.|:      |.||||
  Rat   126 SRSLSRD---------RRRE-----RSLSRERNHKPSRSFSRS------RSRSRS 160

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rsf1	NP_001260318.1	RRM_SRSF3_like	11..82	CDD:409808	38/70 (54%)
Srsf3	NP_001041372.1	RRM_SRSF3	6..86	CDD:241089	40/74 (54%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0107
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1533297at2759
OrthoFinder	1	1.000	-	-		FOG0000474
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR23147
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	6	5.920