DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rsf1 and rbm14a

DIOPT Version :10

Sequence 1:NP_477001.2 Gene:Rsf1 / 34370 FlyBaseID:FBgn0011305 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_001108616.1 Gene:rbm14a / 323721 ZFINID:ZDB-GENE-050522-496 Length:471 Species:Danio rerio


Alignment Length:98 Identity:37/98 - (37%)
Similarity:53/98 - (54%) Gaps:6/98 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 TRVYVGNLTDKVKKDDLEGEFTKYGK-LNSVWIAFNP---PGFAFVEFEHRDDAEKACDILNGSE 70
            |:|:||||......:||...|:.||| |:...:...|   .|:|||..||::|||:|.:.|:|:.
Zfish    83 TKVFVGNLCASCSVEDLYDLFSPYGKVLDCDKVKTKPSSLTGYAFVYMEHKEDAEQAIEGLHGTT 147

  Fly    71 LLGSQLRVEISKGRPRQGRRGGPMDRGGRRGDF 103
            .:|..|.||:||  .:|.....|....|..|.|
Zfish   148 FMGRPLAVELSK--VQQSTNKVPCASCGAHGHF 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rsf1NP_477001.2 RRM_SRSF3_like 11..82 CDD:409808 29/74 (39%)
rbm14aNP_001108616.1 RRM_SF 7..75 CDD:473069
RRM_SF 84..156 CDD:473069 27/71 (38%)
Blue background indicates that the domain is not in the aligned region.

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