Protein Alignment Rsf1 and Srsf5

DIOPT Version :10

• Sequence 1: NP_477001.2
• Gene: Rsf1 / 34370
• FlyBaseID: FBgn0011305
• Length: 200
• Species: Drosophila melanogaster
• Sequence 2: XP_038967784.1
• Gene: Srsf5 / 29667
• RGDID: 3664
• Length: 270
• Species: Rattus norvegicus
• Alignment Length: 228
• Identity: 60/228 - (26%)
• Similarity: 88/228 - (38%)
• Gaps: 46/228 - (20%)

  Fly     9 GTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGSELLG 73
            |.||::|.|....::.|:|..|..||::..:.:   ..||.|||||...||:.|...|:|.||..
  Rat     3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDL---KRGFGFVEFEDPRDADDAVYELDGKELCS 64

  Fly    74 SQLRVEISKGRPRQGR-RGGPMDR-GGRRGDFGRHS----------ITSGGSGGGGF-------R 119
            .::.:|.::.|.|.|| ||...|| ..||....|.:          |....|....:       |
  Rat    65 ERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMR 129

  Fly   120 QRGSSGSSSRHTER---------GYSSGRSGASSYNGREGGGSGF---------------NRREV 160
            |.|....:..|..:         .|...::.....:|:|..|...               :|...
  Rat   130 QAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKLIEGSKRHSRSRSRSRSRT 194

  Fly   161 YGGGRDSSRYSSGSSASYGRTGGQSAGRFRSRS 193
            ....|..||..|..|.||.|:..:|..|.:|||
  Rat   195 RSSSRSRSRSRSRRSKSYSRSRSRSRSRSKSRS 227

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rsf1	NP_477001.2	RRM_SRSF3_like	11..82	CDD:409808	24/70 (34%)
Srsf5	XP_038967784.1	RRM1_SRSF5	5..74	CDD:410008	24/71 (34%)
		RRM2_SRSF5	99..179	CDD:410158	10/79 (13%)