DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Rsf1 and ctf1

DIOPT Version :9

Sequence 1:	NP_001260318.1	Gene:	Rsf1 / 34370	FlyBaseID:	FBgn0011305	Length:	200	Species:	Drosophila melanogaster
Sequence 2:	NP_596669.1	Gene:	ctf1 / 2541018	PomBaseID:	SPBC3B9.11c	Length:	363	Species:	Schizosaccharomyces pombe

Alignment Length:	202	Identity:	45/202 - (22%)
Similarity:	74/202 - (36%)	Gaps:	33/202 - (16%)

- Green bases have known domain annotations that are detailed below.

  Fly     9 GTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNP-----PGFAFVEFEHRDDAEKACDILNG 68
            |..|:|||:...|.:..:...|.:.|.:.:..:..:|     .|:.|.||...:....|...||.
pombe     6 GNVVFVGNIPYDVSEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCEFFDSETTAMAVRKLNN 70

  Fly    69 SELLGSQLRVEISKGRPRQGRRGGPMDRGGR--------RGDFGR-------HSITSGGSGGGGF 118
            |||...::|||.....||:.:.....:|..|        ...:..       ||.:|..:..||.
pombe    71 SELGPRKIRVEFPSNDPRRNQSYEYTERTDRYMEQQNAHESSYNSRFIPPVLHSTSSLPASQGGG 135

  Fly   119 RQRGSSGSSSRHTERGYSSGRSGASSYNGREGGGSGFN-----RREVYG--------GGRDSSRY 170
            ....:..|||..|....:...:...:||......|.|:     ..:.|.        ..::...|
pombe   136 MPSPAIYSSSMATNLNKNINSTSVPAYNFHNSMTSDFDSASQPHTDAYNARTFQYNKSSQNKGDY 200

  Fly   171 SSGSSAS 177
            :||:|.|
pombe   201 TSGTSIS 207

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rsf1	NP_001260318.1	RRM_SRSF3_like	11..82	CDD:409808	21/75 (28%)
ctf1	NP_596669.1	RRM_CSTF2_RNA15_like	9..83	CDD:240844	21/73 (29%)
		CSTF2_hinge	208..281	CDD:291025	45/202 (22%)
		CSTF_C	329..359	CDD:291002
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	1	0.960