Protein Alignment Rsf1 and rsp-6

DIOPT Version :9

• Sequence 1: NP_001260318.1
• Gene: Rsf1 / 34370
• FlyBaseID: FBgn0011305
• Length: 200
• Species: Drosophila melanogaster
• Sequence 2: NP_741446.1
• Gene: rsp-6 / 177566
• WormBaseID: WBGene00004703
• Length: 179
• Species: Caenorhabditis elegans
• Alignment Length: 189
• Identity: 75/189 - (39%)
• Similarity: 94/189 - (49%)
• Gaps: 27/189 - (14%)

  Fly    11 RVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGSELLGSQ 75
            :||||.|.......:||..|.::|::..||:|..||||||||::...|||.|...|:||.:.|.:
 Worm     4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSRICGVR 68

  Fly    76 LRVEISKGRPRQGRRGGPMDRGGRRGDFGRHSITSGGSGGGG-----FR-QRGSSGSSSRHTERG 134
            .|||:|.|:    ||||    |||.|.|       ||.||||     :| .||.|.|.||...|.
 Worm    69 ARVELSTGQ----RRGG----GGRGGGF-------GGRGGGGRDRSPYRGDRGRSRSRSRDRGRD 118

  Fly   135 YSSGRSGASSYNGREGGGSGFNRREVYGGGRDSSRYSSGSSASYGRTGGQSAGRFRSRS 193
            .|..||...| ..|....|....||     |:.:|..|.|.....|:..:|..|.||||
 Worm   119 RSRDRSRDRS-RDRSRDRSRERSRE-----RERTRSRSRSPQERDRSHSKSRSRSRSRS 171

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rsf1	NP_001260318.1	RRM_SRSF3_like	11..82	CDD:409808	31/70 (44%)
rsp-6	NP_741446.1	RRM	<2..>75	CDD:223796	31/70 (44%)
		RRM_SRSF3_like	4..75	CDD:240819	31/70 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1533297at2759
OrthoFinder	1	1.000	-	-		FOG0000474
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR23147
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	5.020