Protein Alignment Rsf1 and rnp-4

DIOPT Version :10

• Sequence 1: NP_477001.2
• Gene: Rsf1 / 34370
• FlyBaseID: FBgn0011305
• Length: 200
• Species: Drosophila melanogaster
• Sequence 2: NP_001369846.1
• Gene: rnp-4 / 175572
• WormBaseID: WBGene00004387
• Length: 142
• Species: Caenorhabditis elegans
• Alignment Length: 89
• Identity: 27/89 - (30%)
• Similarity: 53/89 - (59%)
• Gaps: 7/89 - (7%)

  Fly     9 GTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNP-----PGFAFVEFEHRDDAEKACDILNG 68
            |..|:|.|:.::..:||:..:|::|||:.::.:..:.     .|:|.||:|.:.:|.:|.|..|.
 Worm    54 GWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQSND 118

  Fly    69 SELLGSQLRVE--ISKGRPRQGRR 90
            ::|||..::|:  ..||:...|:|
 Worm   119 TDLLGQNVKVDWCFVKGKKTSGKR 142

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rsf1	NP_477001.2	RRM_SRSF3_like	11..82	CDD:409808	22/77 (29%)
rnp-4	NP_001369846.1	RRM_RBM8	49..136	CDD:409762	24/81 (30%)