Protein Alignment Rsf1 and rnp-5

DIOPT Version :10

• Sequence 1: NP_477001.2
• Gene: Rsf1 / 34370
• FlyBaseID: FBgn0011305
• Length: 200
• Species: Drosophila melanogaster
• Sequence 2: NP_001370330.1
• Gene: rnp-5 / 175244
• WormBaseID: WBGene00004388
• Length: 289
• Species: Caenorhabditis elegans
• Alignment Length: 208
• Identity: 57/208 - (27%)
• Similarity: 81/208 - (38%)
• Gaps: 77/208 - (37%)

  Fly    11 RVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPP---------GFAFVEFEHRDDAEKACDIL 66
            ||.:.||:..|.|..||..|:.||.:.:|.:   ||         |:.:||:::.:||||:...:
 Worm   134 RVVIKNLSRNVLKTHLEEIFSIYGAIKNVDL---PPDRFHNHVHRGYGYVEYDNLEDAEKSIKHM 195

  Fly    67 NGSELLGSQLRVEISKGR---PRQGR-------------RGGPMDRGGRRGDFGRHSITSGGSGG 115
            :|.::.|..:.||::.||   |.|.|             |..||.||||
 Worm   196 DGGQIDGMAVHVEMTIGRQSVPFQRRSSPFRRRSPPPRDRMSPMRRGGR---------------- 244

  Fly   116 GGFRQRGSSGSSSRHTERGYSSGRSGASSYNGREGGGSGFNRREVYGGGRDSSRYSSGSSASYGR 180
                      |...|..|....||            |||.|...:  ||.:..|.:|.|.:..||
 Worm   245 ----------SPPPHRRRSPMGGR------------GSGANNMPL--GGPNRFRRASRSRSPAGR 285

  Fly   181 TGGQSAGRFRSRS 193
                     ||||
 Worm   286 ---------RSRS 289

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rsf1	NP_477001.2	RRM_SRSF3_like	11..82	CDD:409808	25/79 (32%)
rnp-5	NP_001370330.1	RRM_RNPS1	135..208	CDD:409800	22/75 (29%)