Protein Alignment Rsf1 and tiar-2

DIOPT Version :10

• Sequence 1: NP_477001.2
• Gene: Rsf1 / 34370
• FlyBaseID: FBgn0011305
• Length: 200
• Species: Drosophila melanogaster
• Sequence 2: NP_496718.1
• Gene: tiar-2 / 174909
• WormBaseID: WBGene00012904
• Length: 434
• Species: Caenorhabditis elegans
• Alignment Length: 284
• Identity: 67/284 - (23%)
• Similarity: 94/284 - (33%)
• Gaps: 128/284 - (45%)

  Fly     8 RGTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWI-----AFNPPGFAFVEFEHRDDAEKACDILN 67
            |...|:||:|..::....|...|.|:|:::...|     .....|:.||.:..|:|||:|.|.:|
 Worm   130 RHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMN 194

  Fly    68 GSELLGSQLRVEISKGRP-RQGRRGGPMDRGGRRGDFGRHSITSGGSGGGGFRQR---------- 121
            |:.|....:|...:..:| ..|.|||  |||.|||            ||||.|.|
 Worm   195 GAWLGRRTIRTNWATRKPDEDGERGG--DRGDRRG------------GGGGGRDRYHNQSEKTYD 245

  Fly   122 ----------------------------------------------------------------- 121
                                                                             
 Worm   246 EIFNQAAADNTSVYVGNIANLGEDEIRRAFDRFGPINEVRTFKIQGYAFVKFETKESAARAIVQM 310

  Fly   122 --------------GSSGSSSRHTERGYSSGRSGASSYN---GREGGGSGFNRREVYGGGRDSSR 169
                          |.||.|.:.:||| |.|..|:.:|.   |..|||.|       .||..:|:
 Worm   311 NNADIGGQIVRCSWGKSGDSGKPSERG-SGGGGGSGNYGYGYGNSGGGGG-------SGGPGNSQ 367

  Fly   170 YS--------SGSSASYGRTGGQS 185
            :|        ||:..|.|.:|||:
 Worm   368 FSNFNQRPPPSGNGGSGGGSGGQN 391

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rsf1	NP_477001.2	RRM_SRSF3_like	11..82	CDD:409808	22/75 (29%)
tiar-2	NP_496718.1	PABP-1234	41..>317	CDD:130689	40/200 (20%)
		RRM_SF	133..207	CDD:473069	22/73 (30%)
		RRM3_TIA1_like	256..325	CDD:409790	0/68 (0%)