Protein Alignment Rsf1 and rsp-2

DIOPT Version :10

• Sequence 1: NP_477001.2
• Gene: Rsf1 / 34370
• FlyBaseID: FBgn0011305
• Length: 200
• Species: Drosophila melanogaster
• Sequence 2: NP_496441.1
• Gene: rsp-2 / 174747
• WormBaseID: WBGene00004699
• Length: 281
• Species: Caenorhabditis elegans
• Alignment Length: 169
• Identity: 50/169 - (29%)
• Similarity: 68/169 - (40%)
• Gaps: 60/169 - (35%)

  Fly    11 RVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGSELLGSQ 75
            |||:|.|.::....|:|..|..||||:.| |..|  ||.||:|:.:.||:.|...|||.||.|.:
 Worm     3 RVYIGRLPNRASDRDVEHFFRGYGKLSDV-IMKN--GFGFVDFQDQRDADDAVHDLNGKELCGER 64

  Fly    76 LRVEISKGRPRQGRRGGPMDRGGRRGDFGRHSITSGGSGGGGFRQRGSSGSSSRHTERGYSSGRS 140
            :.:|                       |.|..:                         ||:..||
 Worm    65 VILE-----------------------FPRRKV-------------------------GYNEERS 81

  Fly   141 GASSYNGREGGGSGFNRREVYGGGRD-SSRYSSGSSASY 178
            | |.:.|||   ..|.:    ||.|. |:|||...|..:
 Worm    82 G-SGFRGRE---PTFRK----GGERQFSNRYSRPCSTRF 112

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rsf1	NP_477001.2	RRM_SRSF3_like	11..82	CDD:409808	30/70 (43%)
rsp-2	NP_496441.1	RRM1_SRSF4_like	3..72	CDD:409774	31/94 (33%)
		RRM2_SRSF1_4_like	112..181	CDD:409776	0/1 (0%)