DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rsf1 and SF2

DIOPT Version :10

Sequence 1:NP_477001.2 Gene:Rsf1 / 34370 FlyBaseID:FBgn0011305 Length:200 Species:Drosophila melanogaster
Sequence 2:XP_061518009.1 Gene:SF2 / 1275237 VectorBaseID:AGAMI1_006683 Length:234 Species:Anopheles gambiae


Alignment Length:241 Identity:70/241 - (29%)
Similarity:94/241 - (39%) Gaps:75/241 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RVYVGNLTDKVKKDDLEGEFTKYGKLNSVWI--AFNPPGFAFVEFEHRDDAEKACDILNGSELLG 73
            |:|||||...::..|::..|.|:||:..|.:  ...|| |||||||...||:.|....:|.:..|
Mosquito     9 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADDAVKARDGYDYDG 72

  Fly    74 SQLRVEISKGRPRQGRRGGPMD-RGGRRGDFGRHSITSGGSGGGGFRQRG--------------- 122
            .:||||..:|       |||.. ||.|:|:..|:      |.||....||               
Mosquito    73 YRLRVEFPRG-------GGPGSYRGSRQGNSDRN------SRGGDRNNRGPPARRSQFRVMVTGL 124

  Fly   123 -SSGSSS----------------------------RHTERGYSSGRSGASSYNGREGGGSGFNRR 158
             ||||..                            ||.:..|:..:...|.:...||..:..:.|
Mosquito   125 PSSGSWQDLKDHMREAGDVCFADVYKDGTGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIHVR 189

  Fly   159 EVYG----GGRDSSRYSSGSSASYGRTGG-------QSAGRFRSRS 193
            |..|    |.||   |...|.:...|.|.       :|..|.||||
Mosquito   190 EDSGNDDSGKRD---YRDRSYSPRRRRGSPTYSPVQRSVSRSRSRS 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rsf1NP_477001.2 RRM_SRSF3_like 11..82 CDD:409808 30/72 (42%)
SF2XP_061518009.1 None

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