DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rsf1 and LOC1271032

DIOPT Version :10

Sequence 1:NP_477001.2 Gene:Rsf1 / 34370 FlyBaseID:FBgn0011305 Length:200 Species:Drosophila melanogaster
Sequence 2:XP_309774.2 Gene:LOC1271032 / 1271032 VectorBaseID:AGAMI1_014965 Length:393 Species:Anopheles gambiae


Alignment Length:79 Identity:24/79 - (30%)
Similarity:42/79 - (53%) Gaps:5/79 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DQRGTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFN-----PPGFAFVEFEHRDDAEKACDI 65
            |:....|:|||:..:..::.|:..|.:.|.:.|:.:.|:     |.|:.|.|::.::.|..|...
Mosquito    10 DKSMRSVFVGNIPYEATEEKLKDIFCEVGPVLSLKLVFDRESGKPKGYGFCEYKDQETALSAMRN 74

  Fly    66 LNGSELLGSQLRVE 79
            |||.|..|..|||:
Mosquito    75 LNGYEFGGRALRVD 88

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rsf1NP_477001.2 RRM_SRSF3_like 11..82 CDD:409808 23/74 (31%)
LOC1271032XP_309774.2 None

Return to query results.
Submit another query.