DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rsf1 and SRSF8

DIOPT Version :10

Sequence 1:NP_477001.2 Gene:Rsf1 / 34370 FlyBaseID:FBgn0011305 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_115285.1 Gene:SRSF8 / 10929 HGNCID:16988 Length:282 Species:Homo sapiens


Alignment Length:218 Identity:75/218 - (34%)
Similarity:99/218 - (45%) Gaps:37/218 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VGNLTDKVKKDDLEGEFTKYGKLNSVWIAFN-----PPGFAFVEFEHRDDAEKACDILNGSELLG 73
            |.|||.:...|.|...|.|||::..|:|...     |.|||||.|..|.||:.|...::|:||.|
Human    18 VDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAAMDGAELDG 82

  Fly    74 SQLRVEISKGRPRQGRRGGPMDRGG------RRGDFGRHSITSGGSGGG-----GFRQRGSSGSS 127
            .:|||:::    |.|||..|..|.|      |.|.:||.|.:.|.....     ..|.||.|.|.
Human    83 RELRVQVA----RYGRRDLPRSRQGEPRGRSRGGGYGRRSRSYGRRSRSPRRRHRSRSRGPSCSR 143

  Fly   128 SRHTERGYSSGRSGASSYNGREGGGSGFNR--------REV-YGG------GRDSSRYSS-GSSA 176
            ||...| |...|...|.|:......|.::|        ||. |||      |..:||||. .||.
Human   144 SRSRSR-YRGSRYSRSPYSRSPYSRSRYSRSPYSRSRYRESRYGGSHYSSSGYSNSRYSRYHSSR 207

  Fly   177 SYGRTGGQSAGRFRSRSPVGNHR 199
            |:.::|..::.|..|.|...:.|
Human   208 SHSKSGSSTSSRSASTSKSSSAR 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rsf1NP_477001.2 RRM_SRSF3_like 11..82 CDD:409808 30/72 (42%)
SRSF8NP_115285.1 RRM_SRSF2_SRSF8 16..88 CDD:409751 29/69 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..282 45/141 (32%)

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