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Protein Alignment Rsf1 and srsf3b
DIOPT Version :9
Sequence 1: | NP_001260318.1 |
Gene: | Rsf1 / 34370 |
FlyBaseID: | FBgn0011305 |
Length: | 200 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_021324965.1 |
Gene: | srsf3b / 100145909 |
ZFINID: | ZDB-GENE-071005-2 |
Length: | 358 |
Species: | Danio rerio |
Alignment Length: | 116 |
Identity: | 30/116 - (25%) |
Similarity: | 43/116 - (37%) |
Gaps: | 36/116 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 103 FGRHSITSGGS---GGGGFRQRGSSGSSSRHTERGYSSGRSG---AS------------SYNGRE 149
|||..:.:..| .|.|...|.|...|:|.||:..|..||. || ::..:|
Zfish 21 FGRGRLFANSSTPVAGRGSVGRTSEFCSTRVTEQTPSQLRSNPFLASPDLNDTAWQNLITHIAQE 85
Fly 150 GGGSGFNRREVYGGGRDSSRYSSGSSASYGRTGGQSAGRFRSRSPVGNHRF 200
.|.:..: |.||| ||..|.: ...:::|||....|
Zfish 86 VGQTLIS---VQGGG----RYGEGET-----------NNAQTQSPVAGQSF 118
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Rsf1 | NP_001260318.1 |
RRM_SRSF3_like |
11..82 |
CDD:409808 |
|
srsf3b | XP_021324965.1 |
None |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG0107 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000474 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR23147 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.910 |
|
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