DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rsf1 and zcrb1

DIOPT Version :10

Sequence 1:NP_477001.2 Gene:Rsf1 / 34370 FlyBaseID:FBgn0011305 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_001107973.1 Gene:zcrb1 / 100135752 XenbaseID:XB-GENE-999756 Length:215 Species:Xenopus tropicalis


Alignment Length:139 Identity:37/139 - (26%)
Similarity:55/139 - (39%) Gaps:37/139 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VYVGNLTDKVKKDDLEGEFTKYGKLNSVWI-----AFNPPGFAFVEFEHRDDAEKACDILNGSEL 71
            |||.||...:..:||...|:||||:..|.|     :....|.|||.|..::.::.....||..:|
 Frog    12 VYVSNLPFSLTNNDLHRIFSKYGKVVKVTILKDKDSRRSKGVAFVLFLDKESSQNCVRGLNNKQL 76

  Fly    72 LGSQLRVEISKGRPRQGRRGGPMDRGGRRGDFGRHSITSGGSGGGGFRQRGSSGSSSRHTERGYS 136
            .|..::..|:            :| .||..:|              .|:|..:..|     |.|.
 Frog    77 FGRAIKASIA------------ID-NGRATEF--------------IRRRNYTDKS-----RCYE 109

  Fly   137 SGRSGASSY 145
            .|.:|..||
 Frog   110 CGDTGHLSY 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rsf1NP_477001.2 RRM_SRSF3_like 11..82 CDD:409808 24/74 (32%)
zcrb1NP_001107973.1 RRM_ZCRB1 9..84 CDD:409827 23/71 (32%)
PTZ00368 <97..123 CDD:173561 9/27 (33%)

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