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Protein Alignment CG5676 and Fundc1
DIOPT Version :9
Sequence 1: | NP_609362.1 |
Gene: | CG5676 / 34368 |
FlyBaseID: | FBgn0032200 |
Length: | 156 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001020198.1 |
Gene: | Fundc1 / 363442 |
RGDID: | 1563372 |
Length: | 155 |
Species: | Rattus norvegicus |
Alignment Length: | 164 |
Identity: | 41/164 - (25%) |
Similarity: | 77/164 - (46%) |
Gaps: | 40/164 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MTNYS---EIFKKVFND-----IGQRSAYSQMLIGVSSGWVTGYTTMKIGKFAAFAVGGSIILLE 57
:|.|: ..:.:||.. :.:.|..:|:::|..:||..|:...|:||.||.||||..:||:
Rat 23 LTEYARRHHWWNRVFGHSSGPMVEKYSVATQIVMGGVTGWCAGFLFQKVGKLAATAVGGGFLLLQ 87
Fly 58 IAHQEGLIKINWSKLDKSVDKLADKVEASLGREKNWKDKTERYVDNQLDRAESLLTRNGKKVAKW 122
:|...|.::|:|.:::|.|:|...:: |...:|....::|.::.|...:.:|
Rat 88 VASHSGYVQIDWKRVEKDVNKAKRQI-------KKRANKAAPEINNIIEEATDFIKQN------- 138
Fly 123 YTKLIGDEEGPKVNDLHIFLAS-FFGGVALGIAT 155
|.::| |.||..||:|:
Rat 139 -----------------IVISSGFVGGFLLGLAS 155
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG5676 | NP_609362.1 |
FUN14 |
24..153 |
CDD:282747 |
33/129 (26%) |
Fundc1 | NP_001020198.1 |
YXXL |
18..21 |
|
|
FUN14 |
54..153 |
CDD:398543 |
33/129 (26%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
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