DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ror and EMB1290

DIOPT Version :9

Sequence 1:NP_476962.1 Gene:Ror / 34367 FlyBaseID:FBgn0010407 Length:685 Species:Drosophila melanogaster
Sequence 2:NP_001329725.1 Gene:EMB1290 / 828424 AraportID:AT4G23250 Length:1001 Species:Arabidopsis thaliana


Alignment Length:590 Identity:148/590 - (25%)
Similarity:230/590 - (38%) Gaps:157/590 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 SKDIKNISIFKKK-----STIYEDVFSTDISSKYPPTRESENLKRICREECELLENELCQKEYA- 197
            |.|..|::..:|:     .::::::....|.......|.:.|            ...|..|.|| 
plant   140 SNDFFNVNEIRKEDQKEFDSVFDELMFRTIQGASSSVRNNSN------------SLSLSGKYYAK 192

  Fly   198 -IAKRHPVIGMVG-VEDCQKLPQHKDC-LSLGITIEVDKTENCYWEDGSTYRGVANVSASGKPC- 258
             :|. .||.|.:. |..|......||| |.|..:::..|.    |.:|.  ||...:..|   | 
plant   193 DVAP-EPVYGNISVVMQCTPDVSSKDCNLCLERSLDFYKK----WYNGK--RGTIILRPS---CF 247

  Fly   259 LRWSWLMKEISDFPELIGQNYCRNP--------------GSVENSPWCFVDSSRERIIELCDIPK 309
            .||     |:..|.........|:|              .||.|.               .:|.|
plant   248 FRW-----ELYTFFGAFDSINARHPPPPPRPLSPPPLKTPSVTNQ---------------TNITK 292

  Fly   310 CADKIWIAIVGTTAAIIL-----IFIIIFAIILFKRRTIMHYGMRNIHNINTPSADKNIYGNSQL 369
            ..|.....  ||.|||::     |.:|:..:::.|||       :....|..|:.....    .|
plant   293 KNDSRISG--GTIAAIVVVVVVTIILIVVGLVICKRR-------KQKQEIELPTESVQF----DL 344

  Fly   370 NNAQDAGRGNLGNLSDHVALNSKLIERNTLLRINHFTLQDVEFLEELGEGAFGKVYKGQLLQPNK 434
            ...:.|    .||.|:|                           .:||.|.||:||||.||  |.
plant   345 KTIEAA----TGNFSEH---------------------------NKLGAGGFGEVYKGMLL--NG 376

  Fly   435 TTITVAIKALKENASVKTQQDFKREIELISDLKHQNIVCILGVVLNKEPYCMLFEYMANGDLHEF 499
            |.|  |:|.|.: .|.:.:.:||.|:.:::.|:|.|:|.:||..|..|...:::|::.|..|..|
plant   377 TEI--AVKRLSK-TSGQGEIEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVPNKSLDYF 438

  Fly   500 LISNSPTEGKSLSQLEFLQIALQISEGMQYL---SAHHYVHRDLAARNCLVNEGLVVKISDFGLS 561
            |.  .|.:...|.......|...|:.|:.||   |....:||||.|.|.|::..:..||:|||::
plant   439 LF--DPNKRNQLDWTVRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGMA 501

  Fly   562 RDIYSSDYYRVQSKSLL-PVRWMPSESILYGKFTTESDVWSFGVVLWEIYS-------YGMQPYY 618
            | |:..|.....:..:: ...:|..|.:.:|:|:.:|||:||||::.||.|       |.|.   
plant   502 R-IFGVDQTVANTARVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGKKNSSFYQMD--- 562

  Fly   619 GFSNQEVINLI---------RSRQLLSAP---ENCPT----AVYSLMIECWHEQSVKRPTFTDIS 667
            |..|    ||:         ::...|..|   |:|.:    ....:.:.|..|....|||.:.|.
plant   563 GLVN----NLVTYVWKLWENKTMHELIDPFIKEDCKSDEVIRYVHIGLLCVQENPADRPTMSTIH 623

  Fly   668 NRLKT 672
            ..|.|
plant   624 QVLTT 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RorNP_476962.1 CRD_TK_ROR_like 39..228 CDD:143568 22/97 (23%)
KR 235..312 CDD:214527 17/91 (19%)
PTKc_Ror 404..673 CDD:270642 89/296 (30%)
Pkinase_Tyr 410..670 CDD:285015 87/286 (30%)
EMB1290NP_001329725.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 108 1.000 Inparanoid score I2087
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

Return to query results.
Submit another query.