DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ror and ntrk2a

DIOPT Version :9

Sequence 1:NP_476962.1 Gene:Ror / 34367 FlyBaseID:FBgn0010407 Length:685 Species:Drosophila melanogaster
Sequence 2:NP_001353483.1 Gene:ntrk2a / 65090 ZFINID:ZDB-GENE-010126-1 Length:791 Species:Danio rerio


Alignment Length:665 Identity:210/665 - (31%)
Similarity:314/665 - (47%) Gaps:153/665 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 SLCFSSMPICRTPERTNLLYFANVATNAKQLKNVSIRRK-RTKSKDIKNIS-IFKKKSTIYEDVF 159
            :|...::|.|..|..|      ...||....|.:::... .|......|:: ...|.::.:::..
Zfish   174 ALATLTLPDCVLPTVT------LTPTNVTMKKGLNVTLTCNTSGMPTPNLTWTTCKLNSAFKEEG 232

  Fly   160 STDISSKYPPTRESENLKRICREECELLENELCQKEYAIAKR---HPVIGMVGVEDCQKLPQHKD 221
            |..||..........:|...||..|. .:|.:.:.|.::...   .|||..:    ...:|.|..
Zfish   233 SGQISRSQLKLTNVSSLDNKCRITCR-SDNMVGESEASVELDILFPPVISKL----TDAIPDHHW 292

  Fly   222 CLSLGITIEVDKTENCYWEDGSTYRGVANVSASGKPCLRWSWLMKE------------ISDFPEL 274
            |:..                        :||.:.||.||  ||:.|            |.|:.| 
Zfish   293 CIPF------------------------SVSGNPKPKLR--WLLDEQPIQEGKFIHTMIHDYSE- 330

  Fly   275 IGQNY-C---RNPGSVEN------------------------SPW-----CFVDSSRERIIELCD 306
             |:.: |   .:|..:.|                        .||     .:.|::.:      |
Zfish   331 -GEYHGCLQLDSPTHINNGMYTLLARNQFGEDSKAVSAHFMHEPWNVSEPLYYDATTD------D 388

  Fly   307 IP--KCADKIWI-AIVGTTAAIILIFIIIFAIILFKRRTIMHYGMRN--------------IHNI 354
            .|  ...||:.: .:||..|.....|:::..|:.|.|.:  .:|::.              :|::
Zfish   389 TPLGPPEDKVAVYVVVGIAAITFTGFVLMLVILKFGRNS--KFGIKGPSSVISNDDDSASPLHHV 451

  Fly   355 ----NTPS-----ADKNIYGNSQ---LNNAQDAGRGNLGNLSDHVALNSKLIERNTLLRINHFTL 407
                ||||     ||..|.|.::   :.|.|            :....|.|::.:|.  :.|...
Zfish   452 SNGSNTPSSSDMNADAVIIGMTKIPVIENPQ------------YFRSTSSLLKSDTF--VQHIKR 502

  Fly   408 QDVEFLEELGEGAFGKVYKGQL--LQPNKTTITVAIKALKENASVKTQQDFKREIELISDLKHQN 470
            .::....||||||||||:..:.  |..::..|.||:|.||| ||...::||.||.||:::|:|::
Zfish   503 HNIVLKRELGEGAFGKVFLAECYNLSADQEKILVAVKTLKE-ASENARKDFHREAELLTNLQHEH 566

  Fly   471 IVCILGVVLNKEPYCMLFEYMANGDLHEFLISNSP-----TEGK-----SLSQLEFLQIALQISE 525
            ||...||.:..:|..|:||||.:|||::||.::.|     ::|:     .|:|.:.|.||.||:.
Zfish   567 IVTFYGVCVESDPLIMVFEYMMHGDLNKFLRAHGPDAVLMSDGQIQQQAELTQSQMLHIAQQIAA 631

  Fly   526 GMQYLSAHHYVHRDLAARNCLVNEGLVVKISDFGLSRDIYSSDYYRVQSKSLLPVRWMPSESILY 590
            ||.||::.|:||||||.|||||.|.|:|||.|||:|||:||:|||||...::||:||||.|||:|
Zfish   632 GMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY 696

  Fly   591 GKFTTESDVWSFGVVLWEIYSYGMQPYYGFSNQEVINLIRSRQLLSAPENCPTAVYSLMIECWHE 655
            .||||||||||.|||||||::||.||:|..||.|||..|...::|..|..||..||.||:.||..
Zfish   697 RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPKEVYDLMLGCWQR 761

  Fly   656 QSVKRPTFTDISNRL 670
            :...|....:|.|.|
Zfish   762 EPHTRLNIKEIHNLL 776

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RorNP_476962.1 CRD_TK_ROR_like 39..228 CDD:143568 26/135 (19%)
KR 235..312 CDD:214527 21/123 (17%)
PTKc_Ror 404..673 CDD:270642 139/279 (50%)
Pkinase_Tyr 410..670 CDD:285015 137/271 (51%)
ntrk2aNP_001353483.1 LRR_8 84..143 CDD:316378
leucine-rich repeat 86..109 CDD:275378
leucine-rich repeat 110..132 CDD:275378
I-set 186..272 CDD:333254 17/92 (18%)
Ig 292..370 CDD:325142 17/105 (16%)
PKc_like 499..788 CDD:328722 139/279 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1026
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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