DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ror and ror1

DIOPT Version :10

Sequence 1:NP_476962.1 Gene:Ror / 34367 FlyBaseID:FBgn0010407 Length:685 Species:Drosophila melanogaster
Sequence 2:XP_005165942.1 Gene:ror1 / 568282 ZFINID:ZDB-GENE-030131-6104 Length:950 Species:Danio rerio


Alignment Length:685 Identity:258/685 - (37%)
Similarity:363/685 - (52%) Gaps:130/685 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 GICHIYNGTICRDVLSNAHVFVSPNLTMNDLEERLKAAYGVIKESKDMNANCRMYALPSLCFSSM 103
            |.|..|.|..|...:.|..:||.......::|.::.||:.:|..|..::..|..:|:||||..:.
Zfish   176 GFCQPYRGIACARFIGNRSIFVDSLQMQGEIETQITAAFTMIGTSNHLSDRCSQFAIPSLCHFAF 240

  Fly   104 PICRTPERTNLLYFANVATNAKQLKNVSIRRKRTKSKDIKNISIFKKKSTIYEDVFSTDISSKYP 168
            |.|                                                       |.||...
Zfish   241 PTC-------------------------------------------------------DRSSGMD 250

  Fly   169 PTRESENLKRICREECELLENELCQKEYAIAKRHP-VIGMVGVEDCQKL-----PQHKDCLSLGI 227
            ..|:      :|::|||:|||:||:.||.||:.:| ::..:.:..|:.|     |:..:|:.:||
Zfish   251 KPRD------LCKDECEILENDLCKTEYIIARSNPLILKRLKLPKCEDLATLDSPEAANCMRIGI 309

  Fly   228 TI--EVDKTENCYWEDGSTYRGVANVSASGKPCLRWSWLMKEISDF-----PELI-GQNYCRNPG 284
            .|  .::|:..||...||.|||..:|:.||:.|..|:........|     |||. |.:||||||
Zfish   310 PIAETINKSHKCYNNSGSDYRGTVSVTKSGRQCQPWNSQYPHSHTFLAMRYPELNGGHSYCRNPG 374

  Fly   285 SVENSPWCFVDSSRERIIELCDIPKC----------ADKIWIAIVGTTAAIILIFIIIFAIILFK 339
            :..::||||......| :||||||.|          :..|...:|.:.|..:.|.::.|.|.:  
Zfish   375 NKHDAPWCFTLDEAVR-MELCDIPPCDLPKHGSSSNSMGILYILVPSVAIPLAIALLFFFICV-- 436

  Fly   340 RRTIMHYGMRNIHNINTPSADKNIYGNSQLNNAQDAGRGNLGNLSDHVALNSKLIERNTLLRINH 404
                    .||....:.|.|.:.          ....||....:|...|...|       .:...
Zfish   437 --------CRNNQKASRPPAPRQ----------PKPVRGQNVEMSMLTAYKPK-------SKAKE 476

  Fly   405 FTLQDVEFLEELGEGAFGKVYKGQLLQPN-KTTITVAIKALKENASVKTQQDFKREIELISDLKH 468
            ..|..|.|:|||||.||||:|||.|..|. :....||||.||:.:|.:...||::|..::::|.|
Zfish   477 LPLSAVRFMEELGESAFGKIYKGHLYLPGMEHAQLVAIKTLKDISSAQHWGDFQQEASVLAELHH 541

  Fly   469 QNIVCILGVVLNKEPYCMLFEYMANGDLHEFLISNSP------------TEGKSLSQLEFLQIAL 521
            .|:||:||||..::|.|||||::|.||||||||..||            |...||...:||.:|:
Zfish   542 PNVVCLLGVVTQEQPVCMLFEFLAQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHLAI 606

  Fly   522 QISEGMQYLSAHHYVHRDLAARNCLVNEGLVVKISDFGLSRDIYSSDYYRVQSKSLLPVRWMPSE 586
            |::.||:||::|.::|:||||||.||.|.|.:||||.||||:||||||||||..:|||:||||.|
Zfish   607 QVAAGMEYLASHFFIHKDLAARNILVGEQLHIKISDLGLSREIYSSDYYRVQPNTLLPIRWMPPE 671

  Fly   587 SILYGKFTTESDVWSFGVVLWEIYSYGMQPYYGFSNQEVINLIRSRQLLSAPENCPTAVYSLMIE 651
            :|:|||::|:||||:||||||||:|:|:|||||||||||:.::|.||||..||:||..:|:||.|
Zfish   672 AIVYGKYSTDSDVWAFGVVLWEIFSFGLQPYYGFSNQEVMEMVRKRQLLPCPEDCPPRMYALMTE 736

  Fly   652 CWHEQSVKRPTFTDISNRLKTWHEG---HFKASNP 683
            ||.|...:||.|.||..||:.| ||   |..:|.|
Zfish   737 CWQEGPARRPRFKDIHTRLRAW-EGLSSHASSSTP 770

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RorNP_476962.1 CRD_TK_ROR_like 39..228 CDD:143568 44/194 (23%)
KR 235..312 CDD:214527 35/92 (38%)
PTKc_Ror 404..673 CDD:270642 155/281 (55%)
ror1XP_005165942.1 I-set 69..154 CDD:400151
Ig strand B 81..85 CDD:409353
Ig strand C 94..98 CDD:409353
Ig strand E 120..124 CDD:409353
Ig strand F 134..139 CDD:409353
Ig strand G 147..150 CDD:409353
CRD_TK_ROR1 174..315 CDD:143576 46/199 (23%)
KR 319..400 CDD:214527 34/81 (42%)
PTKc_Ror1 476..758 CDD:270672 155/281 (55%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.