DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ror and NTRK1

DIOPT Version :9

Sequence 1:NP_476962.1 Gene:Ror / 34367 FlyBaseID:FBgn0010407 Length:685 Species:Drosophila melanogaster
Sequence 2:NP_002520.2 Gene:NTRK1 / 4914 HGNCID:8031 Length:796 Species:Homo sapiens


Alignment Length:552 Identity:189/552 - (34%)
Similarity:262/552 - (47%) Gaps:119/552 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 SLGITI-----EVDKTENCYWEDGSTYRGVANV-------------------------SASGKPC 258
            |||:|:     ::::.....|.:....|...:|                         |..|:|.
Human   246 SLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNV
SFPASVQLHTAVEMHHWCIPFSVDGQPA 310

  Fly   259 --LRWSW---LMKEIS----DFPELIGQNYCRN-------PGSVENSPWC------FVDSSRERI 301
              |||.:   ::.|.|    :|.|.......|:       |..|.|..:.      |..:|...:
Human   311 PSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIM 375

  Fly   302 IELCDIP----------------------------KCADKIWIAIVGTTAAIILIFIIIFAIILF 338
            ....|.|                            |......:::....|....:|:....::|.
Human   376 AAFMDNPFEFNPEDPIPVSFSPVDTNSTSGDPVEKKDETPFGVSVAVGLAVFACLFLSTLLLVLN 440

  Fly   339 KRRTIMHYGMRNIHNINTP-----------SADKNIYGNSQLNNAQDAGRGNLGNLSDHVALNSK 392
            |      .|.||...||.|           |......|.|.|:..:..|.|    |..|:..|.:
Human   441 K------CGRRNKFGINRPAVLAPEDGLAMSLHFMTLGGSSLSPTEGKGSG----LQGHIIENPQ 495

  Fly   393 LIERNTLLRINHFTLQDVEFLEELGEGAFGKVYKGQL--LQPNKTTITVAIKALKENASVKTQQD 455
            ......   ::|...:|:....||||||||||:..:.  |.|.:..:.||:||||| ||...:||
Human   496 YFSDAC---VHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE-ASESARQD 556

  Fly   456 FKREIELISDLKHQNIVCILGVVLNKEPYCMLFEYMANGDLHEFLISNSPTEGKSLSQLE----- 515
            |:||.||::.|:||:||...||.....|..|:||||.:|||:.||.|:.| :.|.|:..|     
Human   557 FQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGP-DAKLLAGGEDVAPG 620

  Fly   516 ------FLQIALQISEGMQYLSAHHYVHRDLAARNCLVNEGLVVKISDFGLSRDIYSSDYYRVQS 574
                  .|.:|.|::.||.||:..|:||||||.|||||.:||||||.|||:||||||:|||||..
Human   621 PLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGG 685

  Fly   575 KSLLPVRWMPSESILYGKFTTESDVWSFGVVLWEIYSYGMQPYYGFSNQEVINLIRSRQLLSAPE 639
            :::||:||||.|||||.||||||||||||||||||::||.||:|..||.|.|:.|...:.|..|.
Human   686 RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPR 750

  Fly   640 NCPTAVYSLMIECWHEQSVKRPTFTDISNRLK 671
            .||..||::|..||..:..:|.:..|:..||:
Human   751 ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQ 782

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RorNP_476962.1 CRD_TK_ROR_like 39..228 CDD:143568 3/3 (100%)
KR 235..312 CDD:214527 22/151 (15%)
PTKc_Ror 404..673 CDD:270642 144/281 (51%)
Pkinase_Tyr 410..670 CDD:285015 140/272 (51%)
NTRK1NP_002520.2 leucine-rich repeat 68..92 CDD:275378
LRR 1 90..113
LRR_8 92..150 CDD:290566
leucine-rich repeat 93..116 CDD:275378
LRR 2 116..137
leucine-rich repeat 117..139 CDD:275378
leucine-rich repeat 140..152 CDD:275378
TPKR_C2 151..192 CDD:293525
Ig_TrkABC_d4 195..282 CDD:143173 7/35 (20%)
Ig_TrKABC_d5 299..379 CDD:143172 16/79 (20%)
Interaction with SQSTM1. /evidence=ECO:0000250 469..490 6/24 (25%)
PTKc_TrkA 504..783 CDD:270674 144/281 (51%)
Pkinase_Tyr 510..781 CDD:285015 140/272 (51%)
DXXLL. /evidence=ECO:0000269|PubMed:26446845 537..541 0/3 (0%)
DXXLL. /evidence=ECO:0000269|PubMed:26446845 607..611 1/3 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1026
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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