DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ror and Sdr

DIOPT Version :9

Sequence 1:NP_476962.1 Gene:Ror / 34367 FlyBaseID:FBgn0010407 Length:685 Species:Drosophila melanogaster
Sequence 2:NP_001287331.1 Gene:Sdr / 41809 FlyBaseID:FBgn0038279 Length:868 Species:Drosophila melanogaster


Alignment Length:620 Identity:109/620 - (17%)
Similarity:200/620 - (32%) Gaps:208/620 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GSHNVDSRIYGFQQSSGICHIYNGTICRDVLSNAHVFVSPNLTMNDLEERLKAAYG-VIKESKDM 86
            |::::||......:.|....:|.   |..::|...:|  |.|.:...:|.|...|. |:.|::::
  Fly    78 GNYSLDSLASNVTEISDYLMVYR---CTGLISLQSIF--PRLRIIRGQELLFDQYSLVVYENRNL 137

  Fly    87 ------------NANCRMYALPSLCFSSMPICRTPERTNLLYFANVATNAKQLKNVSIRRKRTKS 139
                        :...|:.:.|.|||        .|..:.:|....||.    ::.|::..|.:|
  Fly   138 RELGLVELLRIQSGFIRVESNPLLCF--------VETVDWIYLMGNATR----QHFSLKHNRPQS 190

  Fly   140 K---------DIKNISIFKKKSTIYEDVFSTDISSKYPPTRESENLKRICREECELLENELCQKE 195
            :         |.:.|   :..|....:|.:|.:..:.|..::       |...|           
  Fly   191 QCPLCGSLSADFEFI---RNSSERCWNVNTTQLRPQPPRLKD-------CPIAC----------- 234

  Fly   196 YAIAKRHPVIGMVGVEDCQKLPQHKDCLSLGITIEVDKTENCYWEDGS---TYRG--------VA 249
                      |:.|.:...|...| :|::           .||.::.|   .|:|        ||
  Fly   235 ----------GLNGCDSAGKCCDH-NCVT-----------GCYSQNCSLCANYQGRMGCVNQCVA 277

  Fly   250 NVSASGKPCLRWSWLMKEISDFPELIGQNYCRNPGSVENSPWCFVDSSRERIIELCDIP-----K 309
            :...:.:.|                ||...||                     ||..||     :
  Fly   278 SYELNKRRC----------------IGHRECR---------------------ELGRIPLIRGYQ 305

  Fly   310 CADKIWIAIVGTTAAIILIFIIIFAIILFKRRTIMHYGMRNIHNINTPSADKNIYGNSQLNNAQD 374
            |..|    ..|....|::            .:.|:|..:.       .:.|.::...:.|...||
  Fly   306 CVKK----CPGNQKEILV------------AKGIIHCQVE-------CNGDFHVKSAADLEVLQD 347

  Fly   375 AGRGNLGNLSDHVA-LNSKLIE--RNTLLRINHFT----------LQDVEFLEELGEGAFGKVYK 426
            ....| |:|:..:. :..|:::  .|.|..:...|          |..:.||:.|      ...:
  Fly   348 CVTIN-GSLTIELTNIKEKIVDALENALASVKEITGYLKVIHSAQLMSLTFLQNL------DAIR 405

  Fly   427 GQLLQPNKTTITVAIKALKE-----NASVKTQQD-----------FKREIELISDLKHQNIVCIL 475
            |..|..||..:.|......|     |..|..|:.           :::..:|...||....:.:.
  Fly   406 GDKLVENKYALYVVNNYHLEHIWPPNHLVIIQRGTLFFHLNPRLCYEKIHQLQGSLKSGENISVA 470

  Fly   476 GVVLNKEPYCMLFEYMANGDLHEFLISNSPTEGKSLSQLEFLQIALQISEGMQYLSAHHYVHRDL 540
            .|..|...     |.:..||....|  |...|..:.:.:..: :.....|||:.|..:.|.:::.
  Fly   471 DVSPNSNG-----ERVICGDAVRSL--NPKVEDLNSTAVRII-LDYMDWEGMETLIGYSYHYKEA 527

  Fly   541 AARNCLVNEGLVVKISDFGLSRDIYSSDYYRVQSK 575
            ..:|..:.:|      ..|...|.:..|....||:
  Fly   528 PVQNVTMYDG------RHGCGHDNWLMDVVPNQSR 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RorNP_476962.1 CRD_TK_ROR_like 39..228 CDD:143568 36/210 (17%)
KR 235..312 CDD:214527 17/92 (18%)
PTKc_Ror 404..673 CDD:270642 37/198 (19%)
Pkinase_Tyr 410..670 CDD:285015 35/182 (19%)
SdrNP_001287331.1 Recep_L_domain 58..173 CDD:279382 22/107 (21%)
Furin-like 209..332 CDD:279142 33/222 (15%)
Recep_L_domain 347..461 CDD:279382 22/120 (18%)
FN3 491..578 CDD:214495 14/73 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455350
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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