DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ror and Egfr

DIOPT Version :10

Sequence 1:NP_476962.1 Gene:Ror / 34367 FlyBaseID:FBgn0010407 Length:685 Species:Drosophila melanogaster
Sequence 2:NP_476759.1 Gene:Egfr / 37455 FlyBaseID:FBgn0003731 Length:1426 Species:Drosophila melanogaster


Alignment Length:703 Identity:165/703 - (23%)
Similarity:277/703 - (39%) Gaps:188/703 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 YNGTICRD--VLSNAHVFVSPNLTMNDLEERLKAAYGV----------IKESKDMNANCRMYALP 96
            :|||...|  .:|||:.|  .|.|........:...|.          :::.:...:.|     |
  Fly   598 FNGTCIADCGYISNAYKF--DNRTCKICHPECRTCNGAGADHCQECVHVRDGQHCVSEC-----P 655

  Fly    97 SLCFSSMPICRTPERTNLLYFANVATNAKQLKNVSIRRKRTKSKDIKNISIFKKKSTIYEDVFST 161
            ...::...:||....|     .:..|..|.  .:.|....|.:..|.|.....|:..:.:|....
  Fly   656 KNKYNDRGVCRECHAT-----CDGCTGPKD--TIGIGACTTCNLAIINNDATVKRCLLKDDKCPD 713

  Fly   162 DISSKYPPTRESENLK--------RICREECELLEN-----ELCQKEYAIAKRHPVIGMVGVEDC 213
            ....:|...:|..:||        |.|...|||..|     ::|.|                  |
  Fly   714 GYFWEYVHPQEQGSLKPLAGRAVCRKCHPLCELCTNYGYHEQVCSK------------------C 760

  Fly   214 QKLPQHKDCLSLGITIEVDKTENCYWEDGSTYRGVANVSASGKPCLRWSWLMKEISDFPELIGQN 278
            ....:.:.|       |.:...:.|.::            ..:.|.:.         .||.   |
  Fly   761 THYKRREQC-------ETECPADHYTDE------------EQRECFQC---------HPEC---N 794

  Fly   279 YCRNPGSVE------------NSPWCFVDSSRERIIELCDI-------------PKCA------- 311
            .|..||:.:            |....:|:|:.......|.:             |.||       
  Fly   795 GCTGPGADDCKSCRNFKLFDANETGPYVNSTMFNCTSKCPLEMRHVNYQYTAIGPYCAASPPRSS 859

  Fly   312 ------DKIWIAIVGTTAAIILIFIIIFAIILF--------KRRTIMHYGMRNIHNINTPSADKN 362
                  |...|.|:  |.|:::..|.|..::.:        |:.|:                 |.
  Fly   860 KITANLDVNMIFII--TGAVLVPTICILCVVTYICRQKQKAKKETV-----------------KM 905

  Fly   363 IYGNSQLNNAQDAGRGNLG-NLSDHVALNSKLIERNTLLRINHFTLQDVEFLE--ELGEGAFGKV 424
            ....|...:::.....|:| ||..              |||    ::|.|..:  .||.||||:|
  Fly   906 TMALSGCEDSEPLRPSNIGANLCK--------------LRI----VKDAELRKGGVLGMGAFGRV 952

  Fly   425 YKGQLL-QPNKTTITVAIKALKENASVKTQQDFKREIELISDLKHQNIVCILGVVLNKEPYCMLF 488
            |||..: :.....|.||||.|.::...::.::|.||..:::.::|.|::.:|.|.::.: ..::.
  Fly   953 YKGVWVPEGENVKIPVAIKELLKSTGAESSEEFLREAYIMASVEHVNLLKLLAVCMSSQ-MMLIT 1016

  Fly   489 EYMANGDLHEFLISNSPTEG-KSLSQLEFLQIALQISEGMQYLSAHHYVHRDLAARNCLVNEGLV 552
            :.|..|.|.:::.:|....| |:|     |..:.||::||.||.....|||||||||.||....:
  Fly  1017 QLMPLGCLLDYVRNNRDKIGSKAL-----LNWSTQIAKGMSYLEEKRLVHRDLAARNVLVQTPSL 1076

  Fly   553 VKISDFGLSRDIYSSD---YYRVQSKSLLPVRWMPSESILYGKFTTESDVWSFGVVLWEIYSYGM 614
            |||:||||:: :.|||   |.....|  :|::|:..|.|....||::||||:|||.:||:.::|.
  Fly  1077 VKITDFGLAK-LLSSDSNEYKAAGGK--MPIKWLALECIRNRVFTSKSDVWAFGVTIWELLTFGQ 1138

  Fly   615 QPYYGFSNQEVINLIRSRQLLSAPENCPTAVYSLMIECWHEQSVKRPTFTDIS 667
            :|:.....:::.:||.....|..||.|...:|..::.|||..:..||||..::
  Fly  1139 RPHENIPAKDIPDLIEVGLKLEQPEICSLDIYCTLLSCWHLDAAMRPTFKQLT 1191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RorNP_476962.1 CRD_TK_ROR_like 39..228 CDD:143568 38/208 (18%)
KR 235..312 CDD:214527 15/114 (13%)
PTKc_Ror 404..673 CDD:270642 93/271 (34%)
EgfrNP_476759.1 Recep_L_domain 128..239 CDD:460032
Furin-like 253..401 CDD:395614
Recep_L_domain 419..547 CDD:460032
GF_recep_IV 572..684 CDD:464344 18/99 (18%)
FU 662..716 CDD:214589 11/60 (18%)
GF_recep_IV 740..>834 CDD:464344 21/142 (15%)
PTKc_EGFR_like 930..1208 CDD:270648 96/275 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.