DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ror and Epha2

DIOPT Version :10

Sequence 1:NP_476962.1 Gene:Ror / 34367 FlyBaseID:FBgn0010407 Length:685 Species:Drosophila melanogaster
Sequence 2:NP_001102447.1 Gene:Epha2 / 366492 RGDID:1307204 Length:977 Species:Rattus norvegicus


Alignment Length:361 Identity:128/361 - (35%)
Similarity:195/361 - (54%) Gaps:38/361 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   316 IAIVGTTAAIILIFIIIFAIILFKRRTIMHYGMRNIHNINTPSADKNIYGNSQLNNAQDAGRGNL 380
            :|::|..|..:::.:::..|..|     :|   |...|:....:.:::|.:..         ..|
  Rat   536 MAVIGGVAVGVVLLLVLAGIGFF-----IH---RRRRNLRARQSSEDVYFSKS---------EQL 583

  Fly   381 GNLSDHV------ALNSKLIERNTLLRINHFTLQDVEFLEELGEGAFGKVYKGQLLQPN-KTTIT 438
            ..|..:|      ..|..:::..|.:..:..:.|.|     :|.|.||:||||.|...: |..|.
  Rat   584 KPLKTYVDPHTYEDPNQAVLKFTTEIHPSCVSRQKV-----IGAGEFGEVYKGTLKSSSGKKEIP 643

  Fly   439 VAIKALKENASVKTQQDFKREIELISDLKHQNIVCILGVVLNKEPYCMLFEYMANGDLHEFLISN 503
            ||||.||...:.|.:.||..|..::....|.||:.:.|||...:|..::.|||.||.|.:||   
  Rat   644 VAIKTLKAGYTEKQRVDFLSEASIMGQFSHHNIIRLEGVVSKYKPMMIITEYMENGALDKFL--- 705

  Fly   504 SPTEGKSLSQLEFLQIALQISEGMQYLSAHHYVHRDLAARNCLVNEGLVVKISDFGLSR---DIY 565
            ...:|: .|.|:.:.:...|:.||:||:..:||||||||||.|||..||.|:|||||||   |..
  Rat   706 REKDGE-FSVLQLVGMLRGIASGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 769

  Fly   566 SSDYYRVQSKSLLPVRWMPSESILYGKFTTESDVWSFGVVLWEIYSYGMQPYYGFSNQEVINLIR 630
            .:.|  ..|...:|:||...|:|.|.|||:.|||||:|:|:||:.:||.:||:..||.||:..|.
  Rat   770 EATY--TTSGGKIPIRWTAPEAISYRKFTSASDVWSYGIVMWEVMTYGERPYWELSNHEVMKAIN 832

  Fly   631 SRQLLSAPENCPTAVYSLMIECWHEQSVKRPTFTDI 666
            ....|..|.:||:|:|.||::||.::..:||.|.||
  Rat   833 DGFRLPTPMDCPSAIYQLMMQCWQQERSRRPKFADI 868

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RorNP_476962.1 CRD_TK_ROR_like 39..228 CDD:143568
KR 235..312 CDD:214527
PTKc_Ror 404..673 CDD:270642 114/267 (43%)
Epha2NP_001102447.1 EphR_LBD_A2 27..200 CDD:198448
fn3 331..419 CDD:394996
fn3 439..520 CDD:394996
EphA2_TM <570..611 CDD:464211 6/49 (12%)
Protein Kinases, catalytic domain 608..876 CDD:473864 114/272 (42%)
SAM_EPH-A2 903..972 CDD:188942
Blue background indicates that the domain is not in the aligned region.

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