DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ror and Pvr

DIOPT Version :9

Sequence 1:NP_476962.1 Gene:Ror / 34367 FlyBaseID:FBgn0010407 Length:685 Species:Drosophila melanogaster
Sequence 2:NP_001162911.1 Gene:Pvr / 34127 FlyBaseID:FBgn0032006 Length:1577 Species:Drosophila melanogaster


Alignment Length:789 Identity:177/789 - (22%)
Similarity:291/789 - (36%) Gaps:269/789 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 RDVLSNAHVF---VSPNLTMNDLEERLKAAYGVIKE---SKDMNANCRMYALPSLCFSSMPICRT 108
            |..|:.|||.   :|.|:|:          ||..|:   :|:.|.|....|| :..|..      
  Fly   640 RRTLTKAHVLLGNISENMTI----------YGFDKDHKIAKEDNVNFTCEAL-AYHFDG------ 687

  Fly   109 PERTNLLYFANVATNAKQLKNVSIRRKRTKSKDIKNISIFKKKSTIYEDVFSTDISSKYPPTRES 173
                ||.:|.| ..:.|:..:|.|....||         :..|||::....|......|      
  Fly   688 ----NLKWFIN-GEDLKESDSVHIETSHTK---------YSYKSTVHITTISDRDRGTY------ 732

  Fly   174 ENLKRICREECELLENELCQKEYAIAKRH----------PVIGMVGVEDCQKLPQHKDCLSLGIT 228
                     ||....|:   |:...:.|.          |.....|.|...|:.:     .|..|
  Fly   733 ---------ECRAYHND---KDAVYSSREIDLYVHDPSAPQWTNGGQEGHSKIKR-----KLSQT 780

  Fly   229 IEVDKTENCYWEDGSTYRGVANVSASGKPCLRWSWLMKEIS----------DFPELIGQNYCRNP 283
            :|:        |..||...||.|        ||....||::          :...||...|   |
  Fly   781 LEL--------ECASTAVPVAIV--------RWFKDDKEVTESKLRHIIEKESKLLITHLY---P 826

  Fly   284 GSVENSPWCFVDSSRERI-----IELCDIPKCADK-IWIAIVGTTAAIILIFIIIFAIILFKRRT 342
            |. |....|.|::..:||     :.:.|:|..:.. :|..::   ..:|||.:.:|..:.:::..
  Fly   827 GD-EGVYKCVVENRLDRIERSFTVVISDLPGISMAWVWFGVI---LFLILIGLCVFLAVRYQKEH 887

  Fly   343 IMHYGMRNIHNINTPSADKNIYGNSQLNNAQDAGRGNLGNLSDHVALNSKLIERNTLLRIN---H 404
            ..|..::                .:.|.|.::   |.:|:::..:.|:    |:..||..|   .
  Fly   888 KRHLALK----------------AAGLANFEE---GAVGHINPDLTLD----EQAELLPYNREFE 929

  Fly   405 FTLQDVEFLEELGEGAFGKVYKGQL--LQPNKTTITVAIKALKENASVKTQQDFKREIELISDL- 466
            |..::::..::||.||||.|.||:.  ::..:.|.|||:|.:|..|..:..:....|::::..| 
  Fly   930 FPRENLKLGKQLGAGAFGVVLKGEAKGIRREEPTTTVAVKMVKATADNEVVRALVSELKIMVHLG 994

  Fly   467 KHQNIVCILGVV---LNKEPYCMLFEYMANGDLHEFLISN------------------------- 503
            :|.|:|.:||.|   :.|....::.||...|::..||:.|                         
  Fly   995 QHLNVVNLLGAVTKNIAKRELMVIVEYCRFGNIQNFLLRNRKCFINQINPDTDHIDPSIMTQRMS 1059

  Fly   504 ----------------------------------------------------------------- 503
                                                                             
  Fly  1060 DNYELHRDTNGGGLKYANVGFPIHSYINEPHNNNTQPPTHRRNSDNDPRSGTRAGRTGSGTATYS 1124

  Fly   504 -------------------------------------SPTEGKSLSQLEFLQIALQISEGMQYLS 531
                                                 ..||..:::.::.:..|.|::.||.|||
  Fly  1125 YDRQMDTCATVMTTVPEDDQIMSNNSVQPAWRSNYKTDSTEAMTVTTVDLISWAFQVARGMDYLS 1189

  Fly   532 AHHYVHRDLAARNCLVNEGLVVKISDFGLSRDIYSSDYYRVQSKSLLPVRWMPSESILYGKFTTE 596
            :...:|.||||||.|:.|..||||.||||:|.:|..|.|:......||::|:..||:....|:|.
  Fly  1190 SKKVLHGDLAARNILLCEDNVVKICDFGLARSMYRGDNYKKSENGKLPIKWLALESLSDHVFSTY 1254

  Fly   597 SDVWSFGVVLWEIYSYGMQPYYGFS-NQEVINLIRSRQLLSAPENCPTAVYSLMIECWHEQSVKR 660
            |||||:|:||||::|....||.|.. |||:.|.:.....:..|:.....:|.:|:|||.:....|
  Fly  1255 SDVWSYGIVLWEMFSLAKVPYPGIDPNQELFNKLNDGYRMEKPKFANQELYEIMLECWRKNPESR 1319

  Fly   661 PTFTDISNR 669
            |.|.::..|
  Fly  1320 PLFAELEKR 1328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RorNP_476962.1 CRD_TK_ROR_like 39..228 CDD:143568 41/193 (21%)
KR 235..312 CDD:214527 22/91 (24%)
PTKc_Ror 404..673 CDD:270642 97/400 (24%)
Pkinase_Tyr 410..670 CDD:285015 96/394 (24%)
PvrNP_001162911.1 IG 346..432 CDD:214652
Ig <363..432 CDD:299845
Ig 466..533 CDD:299845
IG_like 672..754 CDD:214653 24/120 (20%)
Ig 674..739 CDD:143165 20/100 (20%)
IGc2 779..840 CDD:197706 20/80 (25%)
PKc_like 927..1332 CDD:304357 97/402 (24%)
Pkinase_Tyr 935..1329 CDD:285015 96/394 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455291
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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