DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ror and sev

DIOPT Version :10

Sequence 1:NP_476962.1 Gene:Ror / 34367 FlyBaseID:FBgn0010407 Length:685 Species:Drosophila melanogaster
Sequence 2:NP_511114.2 Gene:sev / 32039 FlyBaseID:FBgn0003366 Length:2554 Species:Drosophila melanogaster


Alignment Length:744 Identity:209/744 - (28%)
Similarity:310/744 - (41%) Gaps:180/744 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 PNLTMNDLEERLKAAYGVIKESKDMNANCRMYALPSLCFSSMPICRTPE--RTNLLYFANVATNA 124
            |.|.:..||....:|    ..|...|.:.|:.:...|..|.:|    ||  |:..:|:.......
  Fly  1783 PTLVLAPLELLTASA----TPSPPRNFSVRVLSPRELEVSWLP----PEQLRSESVYYTLHWQQE 1839

  Fly   125 KQLKNVSIRR------KRTKSKDIKNISIFKKKSTIYEDVFSTDISSKYPPTRESENLKRICREE 183
            ...:||..||      :|.::.....::..|..|.     :|..:.:...||:.:.:.:...|..
  Fly  1840 LDGENVQDRREWEAHERRLETAGTHRLTGIKPGSG-----YSLWVQAHATPTKSNSSERLHVRSF 1899

  Fly   184 CELLENELCQ------------------------KEYAIAKRHPVIG----MVGVEDCQKLPQHK 220
            .||.|.:|.:                        :..|...|..|.|    || ||..|...:::
  Fly  1900 AELPELQLLELGPYSLSLTWAGTPDPLGSLQLECRSSAEQLRRNVAGNHTKMV-VEPLQPRTRYQ 1963

  Fly   221 DCLSLGITIEVDKTENCYWEDGSTYRGVANV--------SASGKPCL--------RWSW------ 263
            ..|.||....         .....|.|.|.|        |..|||.|        |.:|      
  Fly  1964 CRLLLGYAAT---------PGAPLYHGTAEVYETLGDAPSQPGKPQLEHIAEEVFRVTWTAARGN 2019

  Fly   264 ----------LMKEISDFPELIGQNYCRNPGSVENSPW---------------------CFV--- 294
                      .::..||......:....:.||:|..||                     |.|   
  Fly  2020 GAPIALYNLEALQARSDIRRRRRRRRRNSGGSLEQLPWAEEPVVVEDQWLDFCNTTELSCIVKSL 2084

  Fly   295 DSSR----------------------ERIIELCDIPKCADKIWIAIVGTTAAIILIFIIIFAIIL 337
            .|||                      ||:.|....|:....:.:||:...|   ::...:.|::|
  Fly  2085 HSSRLLLFRVRARSLEHGWGPYSEESERVAEPFVSPEKRGSLVLAIIAPAA---IVSSCVLALVL 2146

  Fly   338 FKRRTIMHYGMRNIHNINTPSADKNIYGNSQLNNAQD----AGRGNLGNLSD-HVALNSKLIERN 397
            .::........:.:...:.||...|:   |.|...|.    ..|.....||| .:||        
  Fly  2147 VRKVQKRRLRAKKLLQQSRPSIWSNL---STLQTQQQLMAVRNRAFSTTLSDADIAL-------- 2200

  Fly   398 TLLRINHFTLQDVEFLEELGEGAFGKVYKGQL-LQPNKTTITVAIKALKENASVKTQQDFKREIE 461
             |.:||...|:.:.|   ||.||||:||:||| .:.::....||||:|::.||  ...:..:|.:
  Fly  2201 -LPQINWSQLKLLRF---LGSGAFGEVYEGQLKTEDSEEPQRVAIKSLRKGAS--EFAELLQEAQ 2259

  Fly   462 LISDLKHQNIVCILGVVLNKEPYCMLFEYMANGDLHEFLIS--------NSPTEGKSLSQLEFLQ 518
            |:|:.||:||||::|:..:.|...::.|:|..|||..:|.:        ..||.|.|||:|  |.
  Fly  2260 LMSNFKHENIVCLVGICFDTESISLIMEHMEAGDLLSYLRAARATSTQEPQPTAGLSLSEL--LA 2322

  Fly   519 IALQISEGMQYLSAHHYVHRDLAARNCLVNEGL-------VVKISDFGLSRDIYSSDYYRVQSKS 576
            :.:.::.|..||...|:||||||.|||||.|..       .|||.||||:||||.|||||.:.:.
  Fly  2323 MCIDVANGCSYLEDMHFVHRDLACRNCLVTESTGSTDRRRTVKIGDFGLARDIYKSDYYRKEGEG 2387

  Fly   577 LLPVRWMPSESILYGKFTTESDVWSFGVVLWEIYSYGMQPYYGFSNQEVINLIRSRQLLSAPENC 641
            |||||||..||::.|.|||:||||:|||:.|||.:.|.|||...:|.||:..::....|..|..|
  Fly  2388 LLPVRWMSPESLVDGLFTTQSDVWAFGVLCWEILTLGQQPYAARNNFEVLAHVKEGGRLQQPPMC 2452

  Fly   642 PTAVYSLMIECWHEQSVKRPTFTDISNRL 670
            ...:|||::.||.....:||:|....|.|
  Fly  2453 TEKLYSLLLLCWRTDPWERPSFRRCYNTL 2481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RorNP_476962.1 CRD_TK_ROR_like 39..228 CDD:143568 42/201 (21%)
KR 235..312 CDD:214527 27/154 (18%)
PTKc_Ror 404..673 CDD:270642 120/283 (42%)
sevNP_511114.2 fn3 439..520 CDD:394996
FN3 826..921 CDD:238020
Vgb 992..>1118 CDD:443399
LY 993..1026 CDD:214531
FN3 1292..1374 CDD:214495
fn3 1800..1891 CDD:394996 20/99 (20%)
FN3 1993..2111 CDD:238020 19/117 (16%)
PTKc_c-ros 2213..2483 CDD:270640 119/276 (43%)
Blue background indicates that the domain is not in the aligned region.

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