DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ror and cam-1

DIOPT Version :9

Sequence 1:NP_476962.1 Gene:Ror / 34367 FlyBaseID:FBgn0010407 Length:685 Species:Drosophila melanogaster
Sequence 2:NP_001021907.1 Gene:cam-1 / 174473 WormBaseID:WBGene00000289 Length:928 Species:Caenorhabditis elegans


Alignment Length:768 Identity:219/768 - (28%)
Similarity:332/768 - (43%) Gaps:192/768 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 GFQQSSGICHIYNGTICRDVLSNAHVFVS--PNLTMNDLEERLKAAYGVIKESKDMNANCRMYAL 95
            |.:...|.|..|.|..||..|||..|.::  ....|.|::..|:||...|..:..::..||..:.
 Worm   197 GIKYRVGDCVQYRGEACRQYLSNKFVMMTNESREEMYDIDRNLRAAMLFINGAPTISQKCRQLSQ 261

  Fly    96 PSLCFSSMPICRTPERTNLLYFANVATNAKQLKNVSIRRKRTKSKDIKNISIFKKKSTIYEDVFS 160
            ...|.....:|.:.....::                                             
 Worm   262 AVACHHMYKVCESDSNNQIV--------------------------------------------- 281

  Fly   161 TDISSKYPPTRESENLKRICREECELLENELCQKEYAIAKRHPVIGMVGVED--------CQKLP 217
                             .||:.:|::::|:.|..|.|:|.:|.::|     |        |.:|.
 Worm   282 -----------------SICKHDCDVIQNDECPSELALAAQHELVG-----DTPKALFPLCSRLS 324

  Fly   218 QHKDCLSLGIT-------IEVDK---TENCYWEDGSTYRGVANVSASGKPCLRWSWLMK---EIS 269
            ...:|:.:..|       .||::   |..||...|:.|.|....::|||.|..|.....   .:.
 Worm   325 STSNCIPVMSTALQSSPVAEVNRGHLTHWCYVNSGTQYEGTVAQTSSGKQCAPWIDSTSRDFNVH 389

  Fly   270 DFPELI-GQNYCRNPGSVENSPWCFVDSSRERIIELCDIPKCA--------DK------------ 313
            .||||: .:|||||||..::.|||:.....:.  |.||:|:|.        ||            
 Worm   390 RFPELMNSKNYCRNPGGKKSRPWCYSKPMGQE--EYCDVPQCPSDMYPHLNDKKVEGSTKGGVSE 452

  Fly   314 ----IW--------IAIVGTTAAIILIFIIIFAIILF-----KRRTIMHYGMRNIHNINTPSADK 361
                :|        :|:||......|:.:::|.....     |.:...|   :|.|..:.||...
 Worm   453 SVTALWDSLDPTMQVALVGGGVFFSLLLLLLFCCACCCRAKKKSQKTRH---QNAHCSSAPSVIN 514

  Fly   362 NIYGNSQLNNAQDAGRGNLGNLSDHVALNSKL----------------------------IERNT 398
            :...::............:|.:..||.:.|.|                            |:.|:
 Worm   515 SAANSAYYRKLNGTSTPIMGRVPPHVEMTSLLPSAQHLGPPPYPMDQHLQQARRFPSQEPIDDNS 579

  Fly   399 LLRINHFTLQDVEFLEELGEGAFGKVYKG----QLLQPNKTTITVAIKALKENASVKTQQDFKRE 459
             .::...|...:...|::|||.||.|:.|    .|..|.  .:.||:|..:.:|:...:...::|
 Worm   580 -YKVFEITPSQLSVREKIGEGQFGVVHSGIYTSGLFAPE--PMAVAVKKCRHDATNAERAQLEQE 641

  Fly   460 IELISDLKHQNIVCILGVVLNKEPYCMLFEYMANGDLHEFLISNSPTE-----GKSLSQLEFLQI 519
            |..::...|.|::.::||.........:||||.:|||||.|....|..     |.:.:..|||.|
 Worm   642 IRAVATFDHPNVIKLIGVCYMDNSLLAVFEYMVHGDLHELLKVRVPPADHDMGGITEANAEFLYI 706

  Fly   520 ALQISEGMQYLSAHHYVHRDLAARNCLVNEGLVVKISDFGLSRDIYSSDYYRVQSKSLLPVRWMP 584
            |.||:.||:||::..:||||||.|||||.:...:||:||||.|..|.||||::..:|.:|||||.
 Worm   707 ATQIALGMEYLASMSFVHRDLATRNCLVGDTRTIKIADFGLMRTSYGSDYYKMLHRSWMPVRWMS 771

  Fly   585 SESILYGKFTTESDVWSFGVVLWEIYSYGMQPYYGFSNQEVINLIRSRQLLSAPENCPTAVYSLM 649
            .|:|..|:|:..||||||||.||||:|:|.|||.|.|||:||.|:.:|.||..|.||||.:||||
 Worm   772 KEAIEQGRFSEASDVWSFGVTLWEIWSFGRQPYEGASNQQVIELVANRHLLECPHNCPTNIYSLM 836

  Fly   650 IECWHEQSVKRPTFTDISNRLKTW-------------------HEGHFKASNP 683
            :|||||...:||||::|.:||::|                   |.|...|..|
 Worm   837 VECWHENIERRPTFSEIRSRLQSWSLASPAHSILQQHNNRAGSHSGSSGAGRP 889

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RorNP_476962.1 CRD_TK_ROR_like 39..228 CDD:143568 34/198 (17%)
KR 235..312 CDD:214527 29/88 (33%)
PTKc_Ror 404..673 CDD:270642 125/277 (45%)
Pkinase_Tyr 410..670 CDD:285015 122/268 (46%)
cam-1NP_001021907.1 I-set 39..127 CDD:254352
Ig 55..122 CDD:143165
CRD_TK_ROR_like 203..335 CDD:143568 34/198 (17%)
KR 352..431 CDD:214527 29/80 (36%)
STYKc 590..857 CDD:214568 122/268 (46%)
PTKc 594..858 CDD:270623 123/265 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167329
Domainoid 1 1.000 248 1.000 Domainoid score I1172
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 352 1.000 Inparanoid score I1329
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48666
OrthoDB 1 1.010 - - D222671at33208
OrthoFinder 1 1.000 - - FOG0003730
OrthoInspector 1 1.000 - - otm14447
orthoMCL 1 0.900 - - OOG6_105406
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3136
SonicParanoid 1 1.000 - - X2586
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.840

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