DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment me31B and Ddx19b

DIOPT Version :10

Sequence 1:NP_523533.2 Gene:me31B / 34364 FlyBaseID:FBgn0004419 Length:459 Species:Drosophila melanogaster
Sequence 2:XP_008770756.1 Gene:Ddx19b / 690693 RGDID:1593382 Length:492 Species:Rattus norvegicus


Alignment Length:436 Identity:150/436 - (34%)
Similarity:241/436 - (55%) Gaps:35/436 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TEKLNSGH-TNLTSKGIINDLQIAGNTSDDMGWKSKLKLPPKDNRFKTTDVTDTRGNEFEEFCLK 66
            |||..... .:..::.::|.| |..|..|:......|:..|....:..        ..|||..||
  Rat    58 TEKTEEDEKEDRAAQSLLNKL-IRSNLVDNTNQVEVLQRDPSSPLYSV--------KSFEELRLK 113

  Fly    67 RELLMGIFEKGWERPSPIQEAAIPIALS--GKDVLARAKNGTGKTGAYCIPVLEQIDPTKDYIQA 129
            .:||.|::..|:.|||.|||.|:|:.|:  .::::|::::|||||.|:.:.:|.|::|..::.|.
  Rat   114 PQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANNHPQC 178

  Fly   130 LVMVPTRELALQTSQICIELAK-HLDIRVMVTTGGTILKDDILRIYQKV--QLIIATPGRILDLM 191
            |.:.||.||||||.::..::.| :.::::.....|..|:..     |||  |::|.|||.:||..
  Rat   179 LCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERG-----QKVGEQIVIGTPGTVLDWC 238

  Fly   192 DK-KVADMSHCRILVLDEADKLLSLDFQGMLDHVI---LKLPKDPQILLFSATFPLTVKNFMEKH 252
            .| |..|....::.||||||.:::.  ||..|..|   ..||::.|:|||||||..:|..|.:|.
  Rat   239 SKMKFIDPKKIKVFVLDEADVMIAT--QGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKV 301

  Fly   253 LREPYEINL-MEELTLKGVTQYYAFVQER-QKVHCLNTLFSKLQINQSIIFCNSTQRVELLAKKI 315
            :.:|..|.| .||.||..:.|||.....| :|...|..|:..:.|.|::|||::.:....||.::
  Rat   302 VPDPNIIKLKREEETLDTIKQYYVLCNNREEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAEL 366

  Fly   316 TELGYCCYYIHAKMAQAHRNRVFHDFRQGLCRNLVCSDLFTRGIDVQAVNVVINFDFP------R 374
            ::.|:....:..:|....|..|...||:|..:.||.:::..|||||:.|:||||||.|      .
  Rat   367 SKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNP 431

  Fly   375 MAETYLHRIGRSGRFGHLGIAINLITYEDRFD-LHRIEKELGTEIK 419
            ..|||||||||:||||..|:|:|::..:...: |:||::....:|:
  Rat   432 DNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIE 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
me31BNP_523533.2 PRK04537 50..>454 CDD:235307 140/388 (36%)
DEADc_DDX6 60..260 CDD:350698 78/208 (38%)
Ddx19bXP_008770756.1 DEAD-like_helicase_N 88..316 CDD:475120 84/242 (35%)
SF2_C_DEAD 320..456 CDD:350174 52/135 (39%)

Return to query results.
Submit another query.