DRSC/TRiP Functional Genomics Resources

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Protein Alignment me31B and Ddx39b

DIOPT Version :10

Sequence 1:NP_523533.2 Gene:me31B / 34364 FlyBaseID:FBgn0004419 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_062667.1 Gene:Ddx39b / 53817 MGIID:99240 Length:428 Species:Mus musculus


Alignment Length:378 Identity:136/378 - (35%)
Similarity:213/378 - (56%) Gaps:6/378 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 FEEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKNGTGKTGAYCIPVLEQIDPTK 124
            |.:|.||.|||..|.:.|:|.||.:|...||.|:.|.|||.:||:|.|||..:.:..|:|::|..
Mouse    47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT 111

  Fly   125 DYIQALVMVPTRELALQTSQICIELAKHL-DIRVMVTTGG-TILKDDILRIYQKVQLIIATPGRI 187
            ..:..|||..|||||.|.|:.....:|:: :::|.|..|| :|.||:.:.......:::.|||||
Mouse   112 GQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176

  Fly   188 LDLMDKKVADMSHCRILVLDEADKLL-SLDFQGMLDHVILKLPKDPQILLFSATFPLTVKNFMEK 251
            |.|...|..::.|.:..:|||.||:| .||.:..:..:....|.:.|:::||||....::....|
Mouse   177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRK 241

  Fly   252 HLREPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRVELLAKK 314
            .:::|.||.:.:|  |||.|:.|||..:::.:|...|..|...|:.||.:||..|.||...||:.
Mouse   242 FMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQL 306

  Fly   315 ITELGYCCYYIHAKMAQAHRNRVFHDFRQGLCRNLVCSDLFTRGIDVQAVNVVINFDFPRMAETY 379
            :.|..:....||..|.|..|...:..|:....|.||.::||.||:|::.||:..|:|.|..::||
Mouse   307 LVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTY 371

  Fly   380 LHRIGRSGRFGHLGIAINLITYE-DRFDLHRIEKELGTEIKPIPKVIDPALYV 431
            |||:.|:||||..|:||..::.| |...|:.::......|..:|..||.:.|:
Mouse   372 LHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYI 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
me31BNP_523533.2 PRK04537 50..>454 CDD:235307 136/378 (36%)
DEADc_DDX6 60..260 CDD:350698 73/202 (36%)
Ddx39bNP_062667.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31
DEADc_DDX39 44..251 CDD:350708 74/203 (36%)
Q motif 45..73 12/25 (48%)
DECD box 196..199 2/2 (100%)
SF2_C_DEAD 262..391 CDD:350174 49/128 (38%)
Blue background indicates that the domain is not in the aligned region.

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