DRSC/TRiP Functional Genomics Resources

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Protein Alignment me31B and Ddx6

DIOPT Version :9

Sequence 1:NP_523533.2 Gene:me31B / 34364 FlyBaseID:FBgn0004419 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_001102762.1 Gene:Ddx6 / 500988 RGDID:1564560 Length:483 Species:Rattus norvegicus


Alignment Length:427 Identity:306/427 - (71%)
Similarity:364/427 - (85%) Gaps:6/427 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 HTNLTSKGIINDLQIAGNT---SDDMGWKSKLKLPPKDNRFKTTDVTDTRGNEFEEFCLKRELLM 71
            :|:..:.|.....|....|   .||  ||..|||||||.|.||:|||.|:|||||::||||||||
  Rat    47 NTSTINNGTQQQAQSMAATIKPGDD--WKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLM 109

  Fly    72 GIFEKGWERPSPIQEAAIPIALSGKDVLARAKNGTGKTGAYCIPVLEQIDPTKDYIQALVMVPTR 136
            ||||.|||:||||||.:|||||||:|:||||||||||:|||.||:||::|..||.|||:|:||||
  Rat   110 GIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTR 174

  Fly   137 ELALQTSQICIELAKHL-DIRVMVTTGGTILKDDILRIYQKVQLIIATPGRILDLMDKKVADMSH 200
            |||||.|||||:::||: ..:||.|||||.|:|||:|:...|.::||||||||||:.|.||.:.|
  Rat   175 ELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDH 239

  Fly   201 CRILVLDEADKLLSLDFQGMLDHVILKLPKDPQILLFSATFPLTVKNFMEKHLREPYEINLMEEL 265
            .:::||||||||||.||..:::.:||.|||:.||||:||||||:|:.||..||::||||||||||
  Rat   240 VQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEEL 304

  Fly   266 TLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHAKMA 330
            ||||||||||:|.|||||||||||||:||||||||||||:||||||||||::|||.|:||||||.
  Rat   305 TLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMR 369

  Fly   331 QAHRNRVFHDFRQGLCRNLVCSDLFTRGIDVQAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIA 395
            |.||||||||||.||||||||:||||||||:||||||||||||::||||||||||||||||||:|
  Rat   370 QEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLA 434

  Fly   396 INLITYEDRFDLHRIEKELGTEIKPIPKVIDPALYVA 432
            ||||||:|||:|..||::|||||||||..||.:||||
  Rat   435 INLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVA 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
me31BNP_523533.2 PTZ00424 60..422 CDD:185609 273/362 (75%)
DEADc 60..260 CDD:238167 133/200 (67%)
HELICc 270..398 CDD:238034 111/127 (87%)
Ddx6NP_001102762.1 DEADc_DDX6 98..299 CDD:350698 133/200 (67%)
SF2_C_DEAD 309..438 CDD:350174 112/128 (88%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 212 1.000 Domainoid score I2698
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3238
Inparanoid 1 1.050 618 1.000 Inparanoid score I851
OMA 1 1.010 - - QHG53572
OrthoDB 1 1.010 - - D288955at33208
OrthoFinder 1 1.000 - - FOG0003076
OrthoInspector 1 1.000 - - oto98705
orthoMCL 1 0.900 - - OOG6_101887
Panther 1 1.100 - - LDO PTHR47960
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2050
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.980

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