DRSC/TRiP Functional Genomics Resources

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Protein Alignment me31B and pit

DIOPT Version :9

Sequence 1:NP_523533.2 Gene:me31B / 34364 FlyBaseID:FBgn0004419 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_001287459.1 Gene:pit / 42595 FlyBaseID:FBgn0266581 Length:680 Species:Drosophila melanogaster


Alignment Length:453 Identity:120/453 - (26%)
Similarity:208/453 - (45%) Gaps:50/453 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KSKLK--LPPKDNRFKTTD----VTDTRGNEFEEF-----CLKRELLMGIFEKGWERPSPIQEAA 88
            |||.:  .|.||:...|.:    ..|.|.::...|     .:....|..|.|.|:...:.||..:
  Fly   153 KSKAQNGKPAKDDEPFTVESSLAALDYRDSDDRSFASLKGAVSEATLRAIKEMGFTEMTEIQSKS 217

  Fly    89 IPIALSGKDVLARAKNGTGKTGAYCIPVLEQIDP----TKDYIQALVMVPTRELALQTSQICIEL 149
            :...|.|:|::..|:.|:|||.|:.||.:|.|:.    .::....:::.|||||::||..:..||
  Fly   218 LTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLRFMPRNGTGVIIISPTRELSMQTFGVLKEL 282

  Fly   150 AKHLDIRVMVTTGGTILKDDILRIYQKVQLIIATPGRILD-LMDKKVADMSHCRILVLDEADKLL 213
            ..|......:..||:..:.:..::.:.:.:::|||||:|| |.:.......:.:.|::||.|::|
  Fly   283 MAHHHHTYGLVMGGSNRQVESEKLGKGINILVATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRIL 347

  Fly   214 SLDFQGMLDHVILKLPKDPQILLFSATFPLTVKNFMEKHLR-EPYEINL---MEELTLKGVTQYY 274
            .:.|:..|..:|..|||..|.:|||||....::...:..|: ||..:.:   .:..|:.|:.|.|
  Fly   348 EIGFEEELKQIINLLPKRRQTMLFSATQTARIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGY 412

  Fly   275 AFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHAKMAQAHRNRVFH 339
            ......:::..|.|...|.:..:.::|.:|...|:...:....:......||.|..|..|...|.
  Fly   413 IVCPSEKRLLVLFTFLKKNRKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFF 477

  Fly   340 DFRQGLCRNLVCSDLFTRGIDVQAVNVVINFDFPRMAETYLHRIGRSGR-FGHLGIAINLITYED 403
            .|.......|:|:|:..||:|:..|:.::.:|.|.....|:||:||:.| .|..|.|:.|:..| 
  Fly   478 QFCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPE- 541

  Fly   404 RFDLHRIEKELG----TEIKPIP---------KVIDPALYVANVGASVGDTCNNSDLNNSANE 453
                     |||    .:...:|         |:.|..|.:..:.|      .|..||.||.|
  Fly   542 ---------ELGFLRYLKAAKVPLNEFEFSWQKIADIQLQLEKLIA------KNYFLNQSAKE 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
me31BNP_523533.2 PTZ00424 60..422 CDD:185609 100/380 (26%)
DEADc 60..260 CDD:238167 60/210 (29%)
HELICc 270..398 CDD:238034 33/128 (26%)
pitNP_001287459.1 SrmB 186..677 CDD:223587 111/420 (26%)
DEADc 187..394 CDD:238167 60/206 (29%)
HELICc 408..537 CDD:238034 33/128 (26%)
DUF4217 569..627 CDD:290667 8/27 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451591
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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