DRSC/TRiP Functional Genomics Resources

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Protein Alignment me31B and ddx39ab

DIOPT Version :10

Sequence 1:NP_523533.2 Gene:me31B / 34364 FlyBaseID:FBgn0004419 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_998142.1 Gene:ddx39ab / 406249 ZFINID:ZDB-GENE-040426-2902 Length:427 Species:Danio rerio


Alignment Length:379 Identity:135/379 - (35%)
Similarity:216/379 - (56%) Gaps:8/379 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 FEEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKNGTGKTGAYCIPVLEQIDPTK 124
            |.:|.||.|||..|.:.|:|.||.:|...||.|:.|.|:|.:||:|.|||..:.:..|:||:|..
Zfish    46 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVD 110

  Fly   125 DYIQALVMVPTRELALQTSQICIELAKHL-DIRVMVTTGGTILK--DDILRIYQKVQLIIATPGR 186
            ..:..|||..|||||.|.|:.....:|:: .::|.|..||..:|  :|:|: .....:::.||||
Zfish   111 GQVSVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMSIKKDEDVLK-KSCPHIVVGTPGR 174

  Fly   187 ILDLMDKKVADMSHCRILVLDEADKLL-SLDFQGMLDHVILKLPKDPQILLFSATFPLTVKNFME 250
            ||.|:..|..::.:.:..||||.||:| .||.:..:..:....|.:.|.::||||....::....
Zfish   175 ILALVRNKTLNLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCR 239

  Fly   251 KHLREPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRVELLAK 313
            |.:::|.|:.:.:|  |||.|:.|||..:::.:|...|..|...|:.||.:||..|.||...|::
Zfish   240 KFMQDPMEVFVDDETKLTLHGLQQYYCKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCVALSQ 304

  Fly   314 KITELGYCCYYIHAKMAQAHRNRVFHDFRQGLCRNLVCSDLFTRGIDVQAVNVVINFDFPRMAET 378
            .:.|..:....||..|||..|...:..|:....|.||.::||.||:|::.||:|.|:|.|..::|
Zfish   305 LLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDT 369

  Fly   379 YLHRIGRSGRFGHLGIAINLITYE-DRFDLHRIEKELGTEIKPIPKVIDPALYV 431
            ||||:.|:||||..|:||..::.| |...|:.::......:..:|:.||.:.|:
Zfish   370 YLHRVARAGRFGTKGLAITFVSDETDAKILNDVQDRFEVNVAELPEEIDISTYI 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
me31BNP_523533.2 PRK04537 50..>454 CDD:235307 135/379 (36%)
DEADc_DDX6 60..260 CDD:350698 73/203 (36%)
ddx39abNP_998142.1 DEADc_DDX39 43..250 CDD:350708 73/204 (36%)
SF2_C_DEAD 261..390 CDD:350174 50/128 (39%)

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