DRSC/TRiP Functional Genomics Resources

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Protein Alignment me31B and Gem3

DIOPT Version :9

Sequence 1:NP_523533.2 Gene:me31B / 34364 FlyBaseID:FBgn0004419 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_001261678.1 Gene:Gem3 / 39195 FlyBaseID:FBgn0011802 Length:1028 Species:Drosophila melanogaster


Alignment Length:395 Identity:146/395 - (36%)
Similarity:213/395 - (53%) Gaps:25/395 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 KTTDVTDTRGNEFEEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKNGTGKTGAY 112
            :::||...:...|||..|.|.||.|:....:..|:.||.||||:||:..|::.::|:|||||..|
  Fly    15 RSSDVAPGQVKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSGTGKTLIY 79

  Fly   113 CIPVLEQIDPTKDYIQALVMVPTRELALQTSQICIELAKHL-DIRVMVTTGGTILKDDILRIYQK 176
            .|.|::..:|..:...|:::|||||||:|.......|.|.. |.:.....|||.:..|..|:.:.
  Fly    80 VIAVVQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDVAKDRKRMNES 144

  Fly   177 VQLIIATPGRILDLMDKKVADMSHCRILVLDEADKLLSLDFQGMLDHVILKL----PKDPQILLF 237
             ::||.||||:|.|.:.:|.|:|..|:|||||||:|....   .|.|.:.||    ||:.||:..
  Fly   145 -RVIIGTPGRLLHLYENRVFDVSKLRLLVLDEADQLYQTK---SLQHTVSKLIEAMPKNRQIIAC 205

  Fly   238 SATFPLTVKNFMEKHLREPYEINLMEELT-LKGVTQY-YAFVQE-------RQKVHCLNTLFSKL 293
            |||:...:...:.|.:.:|..|:..|..| |.|:.|: |...|:       |.|:..|..:|::|
  Fly   206 SATYDQNLDERLAKVMDKPMLISNSERATVLLGIRQFVYELPQQNNSVEEMRLKLQILGQIFNQL 270

  Fly   294 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHAKMAQAHRNRVFHDFRQGLCRNLVCSDLFTRG 358
            ...|:|||.:|..|.:.....:|..|..|:.|...|.|:.|..||..:|....|.||.:||..||
  Fly   271 PYEQAIIFASSQMRADSYKNYLTASGIDCHLISGAMEQSERLHVFEGYRNFTMRILVATDLMARG 335

  Fly   359 IDVQAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLITYE---DRFDLHRIEKELGT--EI 418
            :|....|:|||.|.|:...||||||||:||||..||||..|..:   .||  ..:.|::.|  .:
  Fly   336 VDSPHANLVINIDPPQDHVTYLHRIGRAGRFGSKGIAITFIASKKESQRF--REMSKKIATAWSV 398

  Fly   419 KPIPK 423
            ...||
  Fly   399 LEFPK 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
me31BNP_523533.2 PTZ00424 60..422 CDD:185609 142/380 (37%)
DEADc 60..260 CDD:238167 78/204 (38%)
HELICc 270..398 CDD:238034 54/135 (40%)
Gem3NP_001261678.1 SrmB 24..541 CDD:223587 144/386 (37%)
P-loop_NTPase 27..228 CDD:304359 78/204 (38%)
Helicase_C 259..367 CDD:278689 44/107 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451580
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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