DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment me31B and Gem3

DIOPT Version :10

Sequence 1:NP_523533.2 Gene:me31B / 34364 FlyBaseID:FBgn0004419 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_524019.1 Gene:Gem3 / 39195 FlyBaseID:FBgn0011802 Length:1028 Species:Drosophila melanogaster


Alignment Length:395 Identity:146/395 - (36%)
Similarity:213/395 - (53%) Gaps:25/395 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 KTTDVTDTRGNEFEEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKNGTGKTGAY 112
            :::||...:...|||..|.|.||.|:....:..|:.||.||||:||:..|::.::|:|||||..|
  Fly    15 RSSDVAPGQVKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSGTGKTLIY 79

  Fly   113 CIPVLEQIDPTKDYIQALVMVPTRELALQTSQICIELAKHL-DIRVMVTTGGTILKDDILRIYQK 176
            .|.|::..:|..:...|:::|||||||:|.......|.|.. |.:.....|||.:..|..|:.:.
  Fly    80 VIAVVQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDVAKDRKRMNES 144

  Fly   177 VQLIIATPGRILDLMDKKVADMSHCRILVLDEADKLLSLDFQGMLDHVILKL----PKDPQILLF 237
             ::||.||||:|.|.:.:|.|:|..|:|||||||:|....   .|.|.:.||    ||:.||:..
  Fly   145 -RVIIGTPGRLLHLYENRVFDVSKLRLLVLDEADQLYQTK---SLQHTVSKLIEAMPKNRQIIAC 205

  Fly   238 SATFPLTVKNFMEKHLREPYEINLMEELT-LKGVTQY-YAFVQE-------RQKVHCLNTLFSKL 293
            |||:...:...:.|.:.:|..|:..|..| |.|:.|: |...|:       |.|:..|..:|::|
  Fly   206 SATYDQNLDERLAKVMDKPMLISNSERATVLLGIRQFVYELPQQNNSVEEMRLKLQILGQIFNQL 270

  Fly   294 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHAKMAQAHRNRVFHDFRQGLCRNLVCSDLFTRG 358
            ...|:|||.:|..|.:.....:|..|..|:.|...|.|:.|..||..:|....|.||.:||..||
  Fly   271 PYEQAIIFASSQMRADSYKNYLTASGIDCHLISGAMEQSERLHVFEGYRNFTMRILVATDLMARG 335

  Fly   359 IDVQAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLITYE---DRFDLHRIEKELGT--EI 418
            :|....|:|||.|.|:...||||||||:||||..||||..|..:   .||  ..:.|::.|  .:
  Fly   336 VDSPHANLVINIDPPQDHVTYLHRIGRAGRFGSKGIAITFIASKKESQRF--REMSKKIATAWSV 398

  Fly   419 KPIPK 423
            ...||
  Fly   399 LEFPK 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
me31BNP_523533.2 PRK04537 50..>454 CDD:235307 146/393 (37%)
DEADc_DDX6 60..260 CDD:350698 78/204 (38%)
Gem3NP_524019.1 SrmB 26..409 CDD:440279 144/384 (38%)

Return to query results.
Submit another query.