DRSC/TRiP Functional Genomics Resources

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Protein Alignment me31B and tif1

DIOPT Version :10

Sequence 1:NP_523533.2 Gene:me31B / 34364 FlyBaseID:FBgn0004419 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_594854.1 Gene:tif1 / 2542948 PomBaseID:SPAC1006.07 Length:392 Species:Schizosaccharomyces pombe


Alignment Length:384 Identity:149/384 - (38%)
Similarity:236/384 - (61%) Gaps:8/384 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KDNRFKTT--DVTDTRGNEFEEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKNG 105
            :|:..:|.  :|.||    |::..||.|||.||:..|:||||.||:.||...|..:||||:|::|
pombe     6 EDSVIETNYDEVIDT----FDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGERDVLAQAQSG 66

  Fly   106 TGKTGAYCIPVLEQIDPTKDYIQALVMVPTRELALQTSQICIELAKHLDIRVMVTTGGTILKDDI 170
            ||||..:.|.||::||.:....|||::.||||||.|..::.:.|...:::......|||:::||:
pombe    67 TGKTATFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGDLMNVECHACIGGTLVRDDM 131

  Fly   171 LRIYQKVQLIIATPGRILDLMDKKVADMSHCRILVLDEADKLLSLDFQGMLDHVILKLPKDPQIL 235
            ..:...|.:::.||||:.|::.::.......::.||||||::||..|:..:..:...||...|::
pombe   132 AALQAGVHVVVGTPGRVHDMIQRRALPTDAVQMFVLDEADEMLSRGFKDQIYDIFQLLPPTAQVV 196

  Fly   236 LFSATFPLTVKNFMEKHLREPYEINL-MEELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKLQINQS 298
            |.|||.|..|.....|.:|:|..|.: .:||||:|:.|:|..|: |..|:..|..|:..:.:.|:
pombe   197 LLSATMPQDVLEVTTKFMRDPIRILVKKDELTLEGIKQFYVAVEKEEWKLDTLCDLYETVTVTQA 261

  Fly   299 IIFCNSTQRVELLAKKITELGYCCYYIHAKMAQAHRNRVFHDFRQGLCRNLVCSDLFTRGIDVQA 363
            :||||:.::|:.|.:::||..:....:|..|.||.|:.:.|:||.|..|.|:.:||..||||||.
pombe   262 VIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRTGSSRILITTDLLARGIDVQQ 326

  Fly   364 VNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLITYEDRFDLHRIEKELGTEIKPIP 422
            |::|||:|.|...|.|:|||||.||||..|::||.:|.:|...:..||:...|.|:.:|
pombe   327 VSLVINYDLPANRENYIHRIGRGGRFGRKGVSINFVTNDDVRMMREIEQFYNTHIEEMP 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
me31BNP_523533.2 PRK04537 50..>454 CDD:235307 147/377 (39%)
DEADc_DDX6 60..260 CDD:350698 76/199 (38%)
tif1NP_594854.1 DEAD-like_helicase_N 7..392 CDD:475120 149/383 (39%)

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