DRSC/TRiP Functional Genomics Resources

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Protein Alignment me31B and uap56

DIOPT Version :10

Sequence 1:NP_523533.2 Gene:me31B / 34364 FlyBaseID:FBgn0004419 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_594261.1 Gene:uap56 / 2542433 PomBaseID:SPAC17G6.14C Length:434 Species:Schizosaccharomyces pombe


Alignment Length:411 Identity:142/411 - (34%)
Similarity:226/411 - (54%) Gaps:21/411 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 KLPPKDNRFKTTDVTDTRGN-------EFEEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGK 96
            ::.|..:..:..:.:|.:|:       .|.:|.||.|||..|.:.|:|.||.:|:..||.::.|.
pombe    25 EITPAADTAENGEKSDKKGSYVGIHSTGFRDFLLKPELLRAITDSGFEHPSEVQQVCIPQSILGT 89

  Fly    97 DVLARAKNGTGKTGAYCIPVLEQIDPTKDYIQALVMVPTRELALQTSQICIELAKHL-DIRVMVT 160
            |||.:||:|.|||..:.:..|:||:|....:..||:..|||||.|........:|:| |:|..|.
pombe    90 DVLCQAKSGMGKTAVFVLSTLQQIEPVDGEVSVLVLCHTRELAFQIKNEYARFSKYLPDVRTAVF 154

  Fly   161 TGGTILKDDILRIYQKVQ---LIIATPGRILDLMDKKVADMSHCRILVLDEADKLL-SLDFQGML 221
            .||..:|.|:.....|.:   :::|||||:..|:.:|:..::..:..||||.|||| |:|.:..:
pombe   155 YGGINIKQDMEAFKDKSKSPHIVVATPGRLNALVREKILKVNSVKHFVLDECDKLLESVDMRRDI 219

  Fly   222 DHVILKLPKDPQILLFSATFPLTVKNFMEKHLREPYEINLMEE--LTLKGVTQYYAFVQERQKVH 284
            ..|....|...|:::||||....::...:|.::.|.||.:.:|  |||.|:.|:|..::|:.|..
pombe   220 QEVFRATPPQKQVMMFSATLSNEIRPICKKFMQNPLEIYVDDETKLTLHGLQQHYVKLEEKAKNR 284

  Fly   285 CLNTLFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHAKMAQAH---RNRVFHDFRQGLC 346
            .:|.|...|:.||.:||..|..|...|.:.:.|..:....||..:.|..   |.:.|.||.:.:|
pombe   285 KINDLLDSLEFNQVVIFVKSVSRANELDRLLRECNFPSICIHGGLPQEERIKRYKAFKDFDKRIC 349

  Fly   347 RNLVCSDLFTRGIDVQAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINL-ITYEDRFDLHRI 410
               |.:|:|.||||::.||:|||:|.|...::||||:||:||||..|:||.. .:.||...|.:|
pombe   350 ---VATDVFGRGIDIERVNIVINYDMPDSPDSYLHRVGRAGRFGTKGLAITFSSSEEDSQILDKI 411

  Fly   411 EKELGTEIKPIPKVIDPALYV 431
            ::.....|..:|..||...|:
pombe   412 QERFEVNITELPDEIDVGSYM 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
me31BNP_523533.2 PRK04537 50..>454 CDD:235307 141/400 (35%)
DEADc_DDX6 60..260 CDD:350698 74/204 (36%)
uap56NP_594261.1 DEADc_DDX39 50..259 CDD:350708 75/208 (36%)
SF2_C_DEAD 270..398 CDD:350174 50/130 (38%)

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