DRSC/TRiP Functional Genomics Resources

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Protein Alignment me31B and cgh-1

DIOPT Version :10

Sequence 1:NP_523533.2 Gene:me31B / 34364 FlyBaseID:FBgn0004419 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_498646.1 Gene:cgh-1 / 176061 WormBaseID:WBGene00000479 Length:430 Species:Caenorhabditis elegans


Alignment Length:411 Identity:314/411 - (76%)
Similarity:359/411 - (87%) Gaps:0/411 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 QIAGNTSDDMGWKSKLKLPPKDNRFKTTDVTDTRGNEFEEFCLKRELLMGIFEKGWERPSPIQEA 87
            ||....:.|..||:.|.||.||.||||.|||||:|.|||:|||.|:|||||||||||:|||||||
 Worm     8 QIVPANNGDENWKAGLNLPAKDRRFKTADVTDTKGVEFEDFCLGRDLLMGIFEKGWEKPSPIQEA 72

  Fly    88 AIPIALSGKDVLARAKNGTGKTGAYCIPVLEQIDPTKDYIQALVMVPTRELALQTSQICIELAKH 152
            :|.:||:|:|:||||||||||||||||||:|:|.|....|||:|:||||||||||||||:||:||
 Worm    73 SIGVALTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELSKH 137

  Fly   153 LDIRVMVTTGGTILKDDILRIYQKVQLIIATPGRILDLMDKKVADMSHCRILVLDEADKLLSLDF 217
            :.::||||||||.|:|||:|:...|.|:|||||||||||:|.||.|.||:.|||||||||||.||
 Worm   138 IQLKVMVTTGGTDLRDDIMRLNGTVHLVIATPGRILDLMEKGVAKMEHCKTLVLDEADKLLSQDF 202

  Fly   218 QGMLDHVILKLPKDPQILLFSATFPLTVKNFMEKHLREPYEINLMEELTLKGVTQYYAFVQERQK 282
            ||:||.:|..|||:.|::|:|||||.||.:||:||:.:||||||||||||.|||||||||||:||
 Worm   203 QGILDRLINFLPKERQVMLYSATFPNTVTSFMQKHMHKPYEINLMEELTLLGVTQYYAFVQEKQK 267

  Fly   283 VHCLNTLFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHAKMAQAHRNRVFHDFRQGLCR 347
            ||||||||.||||||||||||||||||||||||||:||.|||||:||||.||||||||||||.||
 Worm   268 VHCLNTLFRKLQINQSIIFCNSTQRVELLAKKITEIGYSCYYIHSKMAQNHRNRVFHDFRQGNCR 332

  Fly   348 NLVCSDLFTRGIDVQAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLITYEDRFDLHRIEK 412
            |||||||.|||||:|||||||||||||.||||||||||||||||||:||||||||||..|.|||:
 Worm   333 NLVCSDLLTRGIDIQAVNVVINFDFPRNAETYLHRIGRSGRFGHLGVAINLITYEDRHTLRRIEQ 397

  Fly   413 ELGTEIKPIPKVIDPALYVAN 433
            ||.|.|:||||.:||.||||:
 Worm   398 ELRTRIEPIPKTVDPKLYVAD 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
me31BNP_523533.2 PRK04537 50..>454 CDD:235307 300/384 (78%)
DEADc_DDX6 60..260 CDD:350698 141/199 (71%)
cgh-1NP_498646.1 DEADc_DDX6 45..245 CDD:350698 141/199 (71%)
SF2_C_DEAD 255..384 CDD:350174 117/128 (91%)

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