DRSC/TRiP Functional Genomics Resources

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Protein Alignment me31B and Ddx6

DIOPT Version :9

Sequence 1:NP_523533.2 Gene:me31B / 34364 FlyBaseID:FBgn0004419 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_001104296.1 Gene:Ddx6 / 13209 MGIID:104976 Length:483 Species:Mus musculus


Alignment Length:427 Identity:306/427 - (71%)
Similarity:364/427 - (85%) Gaps:6/427 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 HTNLTSKGIINDLQIAGNT---SDDMGWKSKLKLPPKDNRFKTTDVTDTRGNEFEEFCLKRELLM 71
            :|:..:.|.....|....|   .||  ||..|||||||.|.||:|||.|:|||||::||||||||
Mouse    47 NTSTINNGTPQQAQSMAATIKPGDD--WKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLM 109

  Fly    72 GIFEKGWERPSPIQEAAIPIALSGKDVLARAKNGTGKTGAYCIPVLEQIDPTKDYIQALVMVPTR 136
            ||||.|||:||||||.:|||||||:|:||||||||||:|||.||:||::|..||.|||:|:||||
Mouse   110 GIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTR 174

  Fly   137 ELALQTSQICIELAKHL-DIRVMVTTGGTILKDDILRIYQKVQLIIATPGRILDLMDKKVADMSH 200
            |||||.|||||:::||: ..:||.|||||.|:|||:|:...|.::||||||||||:.|.||.:.|
Mouse   175 ELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDH 239

  Fly   201 CRILVLDEADKLLSLDFQGMLDHVILKLPKDPQILLFSATFPLTVKNFMEKHLREPYEINLMEEL 265
            .:::||||||||||.||..:::.:||.|||:.||||:||||||:|:.||..||::||||||||||
Mouse   240 VQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEEL 304

  Fly   266 TLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHAKMA 330
            ||||||||||:|.|||||||||||||:||||||||||||:||||||||||::|||.|:||||||.
Mouse   305 TLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMR 369

  Fly   331 QAHRNRVFHDFRQGLCRNLVCSDLFTRGIDVQAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIA 395
            |.||||||||||.||||||||:||||||||:||||||||||||::||||||||||||||||||:|
Mouse   370 QEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLA 434

  Fly   396 INLITYEDRFDLHRIEKELGTEIKPIPKVIDPALYVA 432
            ||||||:|||:|..||::|||||||||..||.:||||
Mouse   435 INLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVA 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
me31BNP_523533.2 PTZ00424 60..422 CDD:185609 273/362 (75%)
DEADc 60..260 CDD:238167 133/200 (67%)
HELICc 270..398 CDD:238034 111/127 (87%)
Ddx6NP_001104296.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..57 2/9 (22%)
Q motif 96..124 23/27 (85%)
DEADc_DDX6 98..299 CDD:350698 133/200 (67%)
DEAD box 246..249 2/2 (100%)
Gyf binding. /evidence=ECO:0000250|UniProtKB:P26196 286..316 24/29 (83%)
RecA-like domain 2. /evidence=ECO:0000250|UniProtKB:P26196 307..483 139/165 (84%)
SF2_C_DEAD 309..438 CDD:350174 112/128 (88%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 212 1.000 Domainoid score I2784
eggNOG 1 0.900 - - E2759_KOG0326
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3238
Inparanoid 1 1.050 618 1.000 Inparanoid score I885
Isobase 1 0.950 - 0 Normalized mean entropy S190
OMA 1 1.010 - - QHG53572
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003076
OrthoInspector 1 1.000 - - oto95215
orthoMCL 1 0.900 - - OOG6_101887
Panther 1 1.100 - - LDO PTHR47960
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R307
SonicParanoid 1 1.000 - - X2050
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.810

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