DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment me31B and ddx61

DIOPT Version :10

Sequence 1:NP_523533.2 Gene:me31B / 34364 FlyBaseID:FBgn0004419 Length:459 Species:Drosophila melanogaster
Sequence 2:XP_001340860.1 Gene:ddx61 / 100007313 ZFINID:ZDB-GENE-030131-6611 Length:483 Species:Danio rerio


Alignment Length:430 Identity:302/430 - (70%)
Similarity:361/430 - (83%) Gaps:9/430 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 DDMGWKSKLKLPPKDNRFKTTDVTDTRGNEFEEFCLKRELLMGIFEKGWERPSPIQEAAIPIALS 94
            ||  ||..|:|||||.|.:|||||.|:|||||::||||||||||||.|||:||||||.:||||||
Zfish    62 DD--WKKCLQLPPKDTRVRTTDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALS 124

  Fly    95 GKDVLARAKNGTGKTGAYCIPVLEQIDPTKDYIQALVMVPTRELALQTSQICIELAKHL-DIRVM 158
            |:|:||||||||||:|||.||:||:||..||||||:|:|||||||||.|||.|.::||| .|:||
Zfish   125 GRDILARAKNGTGKSGAYLIPLLERIDLKKDYIQAIVLVPTRELALQVSQISINMSKHLGGIKVM 189

  Fly   159 VTTGGTILKDDILRIYQKVQLIIATPGRILDLMDKKVADMSHCRILVLDEADKLLSLDFQGMLDH 223
            .|||||.|:|||:|:.:.|.:|||||||||||:.|.||.:...::.|:||||||||.||..:::.
Zfish   190 ATTGGTNLRDDIMRLDEIVHVIIATPGRILDLIKKGVAKVDKVQMAVMDEADKLLSQDFVVLIED 254

  Fly   224 VILKLPKDPQILLFSATFPLTVKNFMEKHLREPYEINLMEELTLKGVTQYYAFVQERQKVHCLNT 288
            :|..|||..||||:|||||::|:.||.|||::|||||||:||||||:|||||:|.||||||||||
Zfish   255 IISFLPKKRQILLYSATFPISVQKFMTKHLQKPYEINLMDELTLKGITQYYAYVTERQKVHCLNT 319

  Fly   289 LFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHAKMAQAHRNRVFHDFRQGLCRNLVCSD 353
            |||:||||||||||||||||||||||||:|||.|:||||||.|.:|||||||||.||||||||:|
Zfish   320 LFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKMMQEYRNRVFHDFRNGLCRNLVCTD 384

  Fly   354 LFTRGIDVQAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLITYEDRFDLHRIEKELGTEI 418
            |||||||:||||||||||||:.|||||||||||||:||||:||||||.||||:|..||.:|.|:|
Zfish   385 LFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLITSEDRFNLKGIEDQLMTDI 449

  Fly   419 KPIPKVIDPALYVANVGASVGDTCNNSDLNNSANEEGNVS 458
            ||||..||.:||||...:.      |.|...:|::.|.::
Zfish   450 KPIPSSIDKSLYVAEFHSM------NPDEEEAAHKTGELN 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
me31BNP_523533.2 PRK04537 50..>454 CDD:235307 289/404 (72%)
DEADc_DDX6 60..260 CDD:350698 134/200 (67%)
ddx61XP_001340860.1 SrmB 90..453 CDD:440279 270/362 (75%)

Return to query results.
Submit another query.