DRSC/TRiP Functional Genomics Resources

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Protein Alignment eEF1delta and Eef1d

DIOPT Version :9

Sequence 1:NP_609361.1 Gene:eEF1delta / 34363 FlyBaseID:FBgn0032198 Length:256 Species:Drosophila melanogaster
Sequence 2:XP_008763773.1 Gene:Eef1d / 300033 RGDID:621174 Length:670 Species:Rattus norvegicus


Alignment Length:292 Identity:142/292 - (48%)
Similarity:178/292 - (60%) Gaps:42/292 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DKFWADKSRYDLAEKRFYE---GPQKVTDRSH--YSPLVSEIAKAREHIQNSLEKIDGV------ 60
            :|.|.||.:||.||:||||   ||.....|..  .|.::.:||:|||:||.||..:..:      
  Rat   379 EKIWFDKFKYDDAERRFYEQMNGPVTAGSRQENGASVILRDIARARENIQKSLAGLKVMLPNSPE 443

  Fly    61 TLDD----------------GLNSELAKRLAQLEGEHKELKTQVSLLNELLTATVKRLETQLK-- 107
            ||..                |.:|:|..|:|.||.|::.|:..|..|.:.::....||.|..|  
  Rat   444 TLGQATPRTSSGPGASSGPGGDHSDLIVRIASLEVENQNLRGVVQDLQQAISKLEVRLSTLEKSS 508

  Fly   108 --------LTNGVSKEPEVE--AKK---PEANDDDDDVDLFGSDSEEEDGEAARIREERLAAYAA 159
                    .|..||...:||  |||   |..:|:|:|:||||||.||||.||||:|||||..||.
  Rat   509 PTHRATAPQTQHVSPMRQVEPPAKKGATPAEDDEDNDIDLFGSDEEEEDKEAARLREERLRQYAE 573

  Fly   160 KKAKKVQIIAKSNIILDVKPWDDETDLKVMETEIRKITQDGLLWGASKFVPVAFGIQKLSISCVV 224
            |||||..::|||:|:|||||||||||:..:||.:|.|..|||:|||||.|||.:||:||.|.|||
  Rat   574 KKAKKPTLVAKSSILLDVKPWDDETDMAQLETCVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVV 638

  Fly   225 EDDKVSIDWLTEEIEKLEDFVQSVDIAAFNKI 256
            |||||..|.|.|||.|.|:.||||||||||||
  Rat   639 EDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEF1deltaNP_609361.1 EF-1_beta_acid 134..>156 CDD:287546 18/21 (86%)
EF1B 168..256 CDD:238181 60/87 (69%)
Eef1dXP_008763773.1 EF1_GNE 587..670 CDD:279125 57/82 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353592
Domainoid 1 1.000 64 1.000 Domainoid score I9920
eggNOG 1 0.900 - - E1_COG2092
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H23404
Inparanoid 1 1.050 234 1.000 Inparanoid score I3327
OMA 1 1.010 - - QHG49458
OrthoDB 1 1.010 - - D1464823at2759
OrthoFinder 1 1.000 - - FOG0001111
OrthoInspector 1 1.000 - - oto98678
orthoMCL 1 0.900 - - OOG6_106570
Panther 1 1.100 - - LDO PTHR11595
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X680
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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